Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475221

Identifier: 113475221

GI number: 113475221

Start: 2317317

End: 2317547

Strand: Direct

Name: 113475221

Synonym: Tery_1527

Alternate gene names: NA

Gene position: 2317317-2317547 (Clockwise)

Preceding gene: 113475215

Following gene: 113475222

Centisome position: 29.9

GC content: 35.93

Gene sequence:

>231_bases
GTGTGTCAGAAAAATGGAACCAGAATTACGTCAATAATAAGTATGCTGAGGTTTCAAGCTCTATTAAATGTACTAAAAAA
AACCGGTAAACTCACCATTCAATGTGATGAAATGTGGTCATTTGTAGGCAATAAAAATAATCAACAATGGCTGTGGTTAG
CGATTGATATAGAAACTCAAGAAATTGTGGGTTTCTACTTAGGGGAAAGAGGAGAAAAAGGGGCAGCATAG

Upstream 100 bases:

>100_bases
AAAATAGTCAAAGAGATTATATTAGTAATGAAACCCAAGAACTGATTGATAAATTAAAATAGAGAAAAAATTAGTTTGGC
TGGTATAATCTGTGTAATAG

Downstream 100 bases:

>100_bases
ATTATAGAATTCTAACCCACGGTGTCTTAAGGCCGTGTGCAGTTTATTATACAAATTTTGGGTCAGCTTACGAGCTTGTT
TTTCCTGATTCAAGACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: IS1 Transposase Subfamily

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA

Sequences:

>Translated_76_residues
MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA
>Mature_76_residues
MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8679; Mature: 8679

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCHH
EIVGFYLGERGEKGAA
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCHH
EIVGFYLGERGEKGAA
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA