| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475221
Identifier: 113475221
GI number: 113475221
Start: 2317317
End: 2317547
Strand: Direct
Name: 113475221
Synonym: Tery_1527
Alternate gene names: NA
Gene position: 2317317-2317547 (Clockwise)
Preceding gene: 113475215
Following gene: 113475222
Centisome position: 29.9
GC content: 35.93
Gene sequence:
>231_bases GTGTGTCAGAAAAATGGAACCAGAATTACGTCAATAATAAGTATGCTGAGGTTTCAAGCTCTATTAAATGTACTAAAAAA AACCGGTAAACTCACCATTCAATGTGATGAAATGTGGTCATTTGTAGGCAATAAAAATAATCAACAATGGCTGTGGTTAG CGATTGATATAGAAACTCAAGAAATTGTGGGTTTCTACTTAGGGGAAAGAGGAGAAAAAGGGGCAGCATAG
Upstream 100 bases:
>100_bases AAAATAGTCAAAGAGATTATATTAGTAATGAAACCCAAGAACTGATTGATAAATTAAAATAGAGAAAAAATTAGTTTGGC TGGTATAATCTGTGTAATAG
Downstream 100 bases:
>100_bases ATTATAGAATTCTAACCCACGGTGTCTTAAGGCCGTGTGCAGTTTATTATACAAATTTTGGGTCAGCTTACGAGCTTGTT TTTCCTGATTCAAGACATAA
Product: hypothetical protein
Products: NA
Alternate protein names: IS1 Transposase Subfamily
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA
Sequences:
>Translated_76_residues MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA >Mature_76_residues MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQEIVGFYLGERGEKGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8679; Mature: 8679
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCHH EIVGFYLGERGEKGAA HHHHHHHCCCCCCCCC >Mature Secondary Structure MCQKNGTRITSIISMLRFQALLNVLKKTGKLTIQCDEMWSFVGNKNNQQWLWLAIDIETQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCHH EIVGFYLGERGEKGAA HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA