Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475212

Identifier: 113475212

GI number: 113475212

Start: 2302943

End: 2304043

Strand: Reverse

Name: 113475212

Synonym: Tery_1515

Alternate gene names: NA

Gene position: 2304043-2302943 (Counterclockwise)

Preceding gene: 113475216

Following gene: 113475211

Centisome position: 29.73

GC content: 36.88

Gene sequence:

>1101_bases
ATGCGCCTAAAATCTCTCGATGTATTTCGTGGCATCACAATTGCTAGTATGATTATTGTTAATAACCCAGGCAGTTGGAA
TCATGTTTATCCACCCTTACTTCATGCAAAATGGCATGGTTGTACTCCCACAGATTTAATATTTCCCTTCTTCTTATTTA
TCATGGGTGTAGCTATGACCTTTTCCCTGTCAAAATACACCGATAAAAATCAACCTATTCCACACATTTACCAAAGAATT
TTCCGCCGATGCCTCATAATTTTCCTGTTTGGTTTGCTACTAAATGGCTTTCCTAATTACAACTTAGCCACTATTAGGGT
TATGGGAGTATTACAACGTATTAGTCTAGTCTATCTTCTCGCAGCAATAGCCATCCTTAACTTGTCCCGAAAACAACTTT
ATGGACTTGCCACTACCCTGCTAATTGGATACTGGATAGCCATGCAACTAATACCTGTTCCTGGTTATGGTCTTGGGAAC
CTTTCTCCAGAAGGAAACTTTGCTGCCTATATTGATCGCTTGATCCTAACTCAACAACATTTGTGGGCAGGCAAACAATA
CGACCCAGAAGGACTTTTTAGCACCTTACCAGCTATAGTAACTGTTTTGATTGGTTACCTTACAGGAGAATGGCTCAAAC
ATCAATCAACAAACAGTCGTACTACCTTAAATATGGTAATTTCTGGTCTAAGTTGTTTAGTAGTCGGGTATCTTTGGGGA
CTATTTTTTCCCATTAATAAAGCTTTATGGACAAGTTCTTATGTAATATTTACTGCCGGATGGGCCTTGCTGTTTTTAGC
TATTTGTTATCAGGCCATGGAGGTTCGAGGCTGGCATAAATGGGGACATCCATTTGAAGTGATGGGATTAAATGCCATAT
TTATATTTATTGGCTCTGGATTTTTGGCCAGGGTAATGATTTATAATAATATTAATAGAGCTGAAAATTCCCCTACAATT
AAAATATGGATATATGAACATTTTTTTCAATCTTGGGCAGGTTCATTTAATGGTTCTTTACTCTTTGCTATTGTCAATTT
ATTATTTTGGTGGAAAATTTCTGATTTAATGTATCGTCGCAGTTTGTTTATTAAAGTTTAA

Upstream 100 bases:

>100_bases
ATAATTCCTAATTATTTACCTGTTTAATAAAATAGCTTTTCTTGCCAATAATAACCAAAATGACTTAGTATAATCTCCTA
CTATAAAAACTAAAATCAAA

Downstream 100 bases:

>100_bases
AGAAAGTAAGTATTCAGCTATCAACTATCAGCACCTTAGCCATAAAAATAAAAGTAGTTAAGTAGGTAAACAATTAGGAA
TTACATATTGATTGAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRLKSLDVFRGITIASMIIVNNPGSWNHVYPPLLHAKWHGCTPTDLIFPFFLFIMGVAMTFSLSKYTDKNQPIPHIYQRI
FRRCLIIFLFGLLLNGFPNYNLATIRVMGVLQRISLVYLLAAIAILNLSRKQLYGLATTLLIGYWIAMQLIPVPGYGLGN
LSPEGNFAAYIDRLILTQQHLWAGKQYDPEGLFSTLPAIVTVLIGYLTGEWLKHQSTNSRTTLNMVISGLSCLVVGYLWG
LFFPINKALWTSSYVIFTAGWALLFLAICYQAMEVRGWHKWGHPFEVMGLNAIFIFIGSGFLARVMIYNNINRAENSPTI
KIWIYEHFFQSWAGSFNGSLLFAIVNLLFWWKISDLMYRRSLFIKV

Sequences:

>Translated_366_residues
MRLKSLDVFRGITIASMIIVNNPGSWNHVYPPLLHAKWHGCTPTDLIFPFFLFIMGVAMTFSLSKYTDKNQPIPHIYQRI
FRRCLIIFLFGLLLNGFPNYNLATIRVMGVLQRISLVYLLAAIAILNLSRKQLYGLATTLLIGYWIAMQLIPVPGYGLGN
LSPEGNFAAYIDRLILTQQHLWAGKQYDPEGLFSTLPAIVTVLIGYLTGEWLKHQSTNSRTTLNMVISGLSCLVVGYLWG
LFFPINKALWTSSYVIFTAGWALLFLAICYQAMEVRGWHKWGHPFEVMGLNAIFIFIGSGFLARVMIYNNINRAENSPTI
KIWIYEHFFQSWAGSFNGSLLFAIVNLLFWWKISDLMYRRSLFIKV
>Mature_366_residues
MRLKSLDVFRGITIASMIIVNNPGSWNHVYPPLLHAKWHGCTPTDLIFPFFLFIMGVAMTFSLSKYTDKNQPIPHIYQRI
FRRCLIIFLFGLLLNGFPNYNLATIRVMGVLQRISLVYLLAAIAILNLSRKQLYGLATTLLIGYWIAMQLIPVPGYGLGN
LSPEGNFAAYIDRLILTQQHLWAGKQYDPEGLFSTLPAIVTVLIGYLTGEWLKHQSTNSRTTLNMVISGLSCLVVGYLWG
LFFPINKALWTSSYVIFTAGWALLFLAICYQAMEVRGWHKWGHPFEVMGLNAIFIFIGSGFLARVMIYNNINRAENSPTI
KIWIYEHFFQSWAGSFNGSLLFAIVNLLFWWKISDLMYRRSLFIKV

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI150378452, Length=423, Percent_Identity=26.9503546099291, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24639786, Length=353, Percent_Identity=31.728045325779, Blast_Score=139, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41846; Mature: 41846

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKSLDVFRGITIASMIIVNNPGSWNHVYPPLLHAKWHGCTPTDLIFPFFLFIMGVAMT
CCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FSLSKYTDKNQPIPHIYQRIFRRCLIIFLFGLLLNGFPNYNLATIRVMGVLQRISLVYLL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AAIAILNLSRKQLYGLATTLLIGYWIAMQLIPVPGYGLGNLSPEGNFAAYIDRLILTQQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LWAGKQYDPEGLFSTLPAIVTVLIGYLTGEWLKHQSTNSRTTLNMVISGLSCLVVGYLWG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFFPINKALWTSSYVIFTAGWALLFLAICYQAMEVRGWHKWGHPFEVMGLNAIFIFIGSG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHEEEEECCCH
FLARVMIYNNINRAENSPTIKIWIYEHFFQSWAGSFNGSLLFAIVNLLFWWKISDLMYRR
HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLFIKV
HHHCCC
>Mature Secondary Structure
MRLKSLDVFRGITIASMIIVNNPGSWNHVYPPLLHAKWHGCTPTDLIFPFFLFIMGVAMT
CCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FSLSKYTDKNQPIPHIYQRIFRRCLIIFLFGLLLNGFPNYNLATIRVMGVLQRISLVYLL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AAIAILNLSRKQLYGLATTLLIGYWIAMQLIPVPGYGLGNLSPEGNFAAYIDRLILTQQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LWAGKQYDPEGLFSTLPAIVTVLIGYLTGEWLKHQSTNSRTTLNMVISGLSCLVVGYLWG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFFPINKALWTSSYVIFTAGWALLFLAICYQAMEVRGWHKWGHPFEVMGLNAIFIFIGSG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEHHHHEEEEECCCH
FLARVMIYNNINRAENSPTIKIWIYEHFFQSWAGSFNGSLLFAIVNLLFWWKISDLMYRR
HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLFIKV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA