| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475205
Identifier: 113475205
GI number: 113475205
Start: 2291951
End: 2292667
Strand: Reverse
Name: 113475205
Synonym: Tery_1507
Alternate gene names: NA
Gene position: 2292667-2291951 (Counterclockwise)
Preceding gene: 113475206
Following gene: 113475204
Centisome position: 29.58
GC content: 34.31
Gene sequence:
>717_bases ATGAATAGAAGTCAGAATTTACTATTGTTAGTAGTTTTAATTGTAATCATTGGTGGGTTGGCCTTATTTGCTTGGCAAAA TTGGTCTCCTAGTTTGCAATTAACTTTTCTGGGATTAAAGTCCGTATCTCTACCTATTTCTATATGGATTTTAGGTGCTC TTGTTGCAGGTGTAATTACTTATTTGCTGATTTATGGTATTTTTGAACTTTCAAATTACTTTTTCAACCAAAATTTACAA TCTGTTAAACCAACTTCAAGAAAATTTCAATATCAAGATCAACCAGGGGAAAGCAAGGATAAATATTCACACTATCAAGA AACCTCAAATTATCAAAGCTCCTTTAACCTTAATAAAGATTTGGAACTAAGGGAGGAAGAGGAAAATATTGATGATTGGG AACAAGAACCTCCTAAAATTAGTAATTCTTGGGATAGTAGCACACAAGAACAAGTTATTGGAGATACGCAAAAGTCTGTT AGTCAAGATTCTACAGAGAAAAATTATGAAGTGAAACAAGAACCAGAAATAGAGTCTTGGTCTGGTTCGGTTTATTCTTA TGGTTATCGCGAACCTAGTGATTCAGGGGTTGGTCAAACCGAATCTTTGTATGATGCTGATTATCGGGTTATTACTCCAC CGCCTCCTCAAGATCAATCTACACCAAATCAAAAGAAAGAAGATGAAGATGGTCCTCCAGAAGATAAGAAGAATTAA
Upstream 100 bases:
>100_bases AATAATACCCAAACTATAGAAGATTTGGTAGACTTTGTGGTAGCTCGTGCTCTAGACCAATTTGGTTTAGATTGTGTTCC TATTAAGCGGTGAGTAGGCC
Downstream 100 bases:
>100_bases CCAGGCAATTAATAGCTTAAATTAAGTTGACTTAAAATTGGTGGTGTTTTTGTATAGTAAGTAGTTATGATTTAGGAAAA ACAAAAGGCTAGGGGTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNRSQNLLLLVVLIVIIGGLALFAWQNWSPSLQLTFLGLKSVSLPISIWILGALVAGVITYLLIYGIFELSNYFFNQNLQ SVKPTSRKFQYQDQPGESKDKYSHYQETSNYQSSFNLNKDLELREEEENIDDWEQEPPKISNSWDSSTQEQVIGDTQKSV SQDSTEKNYEVKQEPEIESWSGSVYSYGYREPSDSGVGQTESLYDADYRVITPPPPQDQSTPNQKKEDEDGPPEDKKN
Sequences:
>Translated_238_residues MNRSQNLLLLVVLIVIIGGLALFAWQNWSPSLQLTFLGLKSVSLPISIWILGALVAGVITYLLIYGIFELSNYFFNQNLQ SVKPTSRKFQYQDQPGESKDKYSHYQETSNYQSSFNLNKDLELREEEENIDDWEQEPPKISNSWDSSTQEQVIGDTQKSV SQDSTEKNYEVKQEPEIESWSGSVYSYGYREPSDSGVGQTESLYDADYRVITPPPPQDQSTPNQKKEDEDGPPEDKKN >Mature_238_residues MNRSQNLLLLVVLIVIIGGLALFAWQNWSPSLQLTFLGLKSVSLPISIWILGALVAGVITYLLIYGIFELSNYFFNQNLQ SVKPTSRKFQYQDQPGESKDKYSHYQETSNYQSSFNLNKDLELREEEENIDDWEQEPPKISNSWDSSTQEQVIGDTQKSV SQDSTEKNYEVKQEPEIESWSGSVYSYGYREPSDSGVGQTESLYDADYRVITPPPPQDQSTPNQKKEDEDGPPEDKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27181; Mature: 27181
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSQNLLLLVVLIVIIGGLALFAWQNWSPSLQLTFLGLKSVSLPISIWILGALVAGVIT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH YLLIYGIFELSNYFFNQNLQSVKPTSRKFQYQDQPGESKDKYSHYQETSNYQSSFNLNKD HHHHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCC LELREEEENIDDWEQEPPKISNSWDSSTQEQVIGDTQKSVSQDSTEKNYEVKQEPEIESW CCCCCHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SGSVYSYGYREPSDSGVGQTESLYDADYRVITPPPPQDQSTPNQKKEDEDGPPEDKKN CCCEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRSQNLLLLVVLIVIIGGLALFAWQNWSPSLQLTFLGLKSVSLPISIWILGALVAGVIT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH YLLIYGIFELSNYFFNQNLQSVKPTSRKFQYQDQPGESKDKYSHYQETSNYQSSFNLNKD HHHHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCC LELREEEENIDDWEQEPPKISNSWDSSTQEQVIGDTQKSVSQDSTEKNYEVKQEPEIESW CCCCCHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SGSVYSYGYREPSDSGVGQTESLYDADYRVITPPPPQDQSTPNQKKEDEDGPPEDKKN CCCEEECCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA