| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is txlA [H]
Identifier: 113475202
GI number: 113475202
Start: 2287727
End: 2288308
Strand: Reverse
Name: txlA [H]
Synonym: Tery_1504
Alternate gene names: 113475202
Gene position: 2288308-2287727 (Counterclockwise)
Preceding gene: 113475204
Following gene: 113475198
Centisome position: 29.53
GC content: 38.66
Gene sequence:
>582_bases ATGAATGCAAATCAATCTAATTCTACAAATATTTCCTCTTTAGTGACACGCCTGAGAAATTTTATGATTGTGTCAGTAGC GATCGCTTTATCAGTAAGCATTTTTATGGCTCTGCGAACTGATAAGCTCTCCGTTTCCTTAAATGAAATGGCTCAAGCTG CAACACCTTTGGATGTAGCATTAAGCAATAATAAGCCAACTCTAGTTGAATTTTATGCTAATTGGTGTACGACTTGTCAA GCCATGGCTCCTGAGTTGGAGGAAATTAGACAAAAGTATACTCAGAATACCAACTTTGTGATGTTAAATGTTGATAATAG CAGGTGGTTACCAGAATTGGTTGAATATCGGGTAGATGGTATTCCACACTTTGTCTTTCTAGATCGGGAGGGAACTGAAG TTGGCCAGACTATTGGAGAAGTACCAAAATCTATCATGGCAGCAAATATAGAAGCTTTAGTTGCCGGAAGTTATTTACCA TATAATAGTACAGTTGGTCAAGGTTCTCACTTTAATGCTCCAGTAGAACCAACTAAAGCCAGTCAAGCCGATCCTCGAGT TCACGGTAGTCAAGTAAAATAG
Upstream 100 bases:
>100_bases AAAATTTGTACAACTTATTTTTACTGATTCCTTAGCTCTAAAAGAGACATTGGTTTCAACTGCTTTTCGATAATTTTAAT AACTATTTAATTTTCTGACA
Downstream 100 bases:
>100_bases TTGAGTGATCAAACCGATTTAATCTAGTTAATTTATGAGGCTAGCAGGGAAGAGAGAGAGTATTCAAATTGCTTTAAAAA ACTACCAACAAAATATTACA
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNANQSNSTNISSLVTRLRNFMIVSVAIALSVSIFMALRTDKLSVSLNEMAQAATPLDVALSNNKPTLVEFYANWCTTCQ AMAPELEEIRQKYTQNTNFVMLNVDNSRWLPELVEYRVDGIPHFVFLDREGTEVGQTIGEVPKSIMAANIEALVAGSYLP YNSTVGQGSHFNAPVEPTKASQADPRVHGSQVK
Sequences:
>Translated_193_residues MNANQSNSTNISSLVTRLRNFMIVSVAIALSVSIFMALRTDKLSVSLNEMAQAATPLDVALSNNKPTLVEFYANWCTTCQ AMAPELEEIRQKYTQNTNFVMLNVDNSRWLPELVEYRVDGIPHFVFLDREGTEVGQTIGEVPKSIMAANIEALVAGSYLP YNSTVGQGSHFNAPVEPTKASQADPRVHGSQVK >Mature_193_residues MNANQSNSTNISSLVTRLRNFMIVSVAIALSVSIFMALRTDKLSVSLNEMAQAATPLDVALSNNKPTLVEFYANWCTTCQ AMAPELEEIRQKYTQNTNFVMLNVDNSRWLPELVEYRVDGIPHFVFLDREGTEVGQTIGEVPKSIMAANIEALVAGSYLP YNSTVGQGSHFNAPVEPTKASQADPRVHGSQVK
Specific function: Required for disulfide bond formation in some proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 21224; Mature: 21224
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANQSNSTNISSLVTRLRNFMIVSVAIALSVSIFMALRTDKLSVSLNEMAQAATPLDVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCEEE LSNNKPTLVEFYANWCTTCQAMAPELEEIRQKYTQNTNFVMLNVDNSRWLPELVEYRVDG ECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC IPHFVFLDREGTEVGQTIGEVPKSIMAANIEALVAGSYLPYNSTVGQGSHFNAPVEPTKA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQADPRVHGSQVK CCCCCCCCCCCCC >Mature Secondary Structure MNANQSNSTNISSLVTRLRNFMIVSVAIALSVSIFMALRTDKLSVSLNEMAQAATPLDVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCEEE LSNNKPTLVEFYANWCTTCQAMAPELEEIRQKYTQNTNFVMLNVDNSRWLPELVEYRVDG ECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC IPHFVFLDREGTEVGQTIGEVPKSIMAANIEALVAGSYLPYNSTVGQGSHFNAPVEPTKA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SQADPRVHGSQVK CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA