| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475190
Identifier: 113475190
GI number: 113475190
Start: 2263346
End: 2263981
Strand: Direct
Name: 113475190
Synonym: Tery_1490
Alternate gene names: NA
Gene position: 2263346-2263981 (Clockwise)
Preceding gene: 113475189
Following gene: 113475191
Centisome position: 29.2
GC content: 38.05
Gene sequence:
>636_bases ATGGTAGGTTTGGAACCGACGGACAAAGTCTTAGATATTGGTTGCGGTGTAGGCCGCATTGCTTATCCTTTAACCTATTA TCTAAAAGATGGAGGTGGATATGAGGGTTTTGATATTAGTGAAAAGTTAATTAAGTGGGCTAAATCTGAAATTAGTTTGA GGTTTCCTAATTTCAATTTTCAGGTAGTCGATATCCATAATAAAATGTACAATCCTGAAGGAAATGTTCAAACTTTGGAT TTTGTATTTCCCTACCAGGATAAAAGTTTTGATTGGGTTGTGTTAACTTCGGTGTTTACTCATTTGCAGGCAAAGGAAGT CCGACATTATCTGGATGAAATTACTAGGGTATTAAAACCTCGCGGTCGATGTTTGTGTACTTGTTTTCTCTTAAACCCTG AGTCAGAAGCAGCAATGACCAAAAATAAAAAGGCTCGTCAAATTGTACATCCACTTGAGGAGTGTTTTACCGCCACTCCC AAGATACCAGAGTCTACTATTGGTTATAAAGAAGGGTTACTTTTAGGCTGGATGCAAGAACGAGGGTTAAGTCTAGCGGG AAAATATTATGGTCATTGGTGTGGGCGGAGAAAGTTTACCAGTCATCAAGATATATTGGTATTGCAAAAAAGTTAG
Upstream 100 bases:
>100_bases TTTAGAACCCTCTTTGCCTATTCCTCCTCATGAATACATTAAGTTTGTAGGGGGGCATTTTACAGATGTGGGTTTCAACT TTCTCGGTTATTAGATCCAA
Downstream 100 bases:
>100_bases GGCAAATGGTCTGGCAATGGTATTGTAAAAATTTATTTAAATGTTGGTTAACGACCAGTGCTTTTCAGAGATTACTTTTG ACTTTCTTAATGGTAAATCA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS
Sequences:
>Translated_211_residues MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS >Mature_211_residues MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To R.meliloti expE3 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 24219; Mature: 24219
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNF CCCCCCCCHHEECCCCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCE QVVDIHNKMYNPEGNVQTLDFVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKP EEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC RGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATPKIPESTIGYKEGLLLGWMQE CCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEHHHH RGLSLAGKYYGHWCGRRKFTSHQDILVLQKS CCCCCHHHHHHHHCCCCCCCCCCCEEEEECC >Mature Secondary Structure MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNF CCCCCCCCHHEECCCCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCE QVVDIHNKMYNPEGNVQTLDFVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKP EEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC RGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATPKIPESTIGYKEGLLLGWMQE CCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEHHHH RGLSLAGKYYGHWCGRRKFTSHQDILVLQKS CCCCCHHHHHHHHCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]