| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475189
Identifier: 113475189
GI number: 113475189
Start: 2262896
End: 2263339
Strand: Direct
Name: 113475189
Synonym: Tery_1489
Alternate gene names: NA
Gene position: 2262896-2263339 (Clockwise)
Preceding gene: 113475184
Following gene: 113475190
Centisome position: 29.2
GC content: 38.06
Gene sequence:
>444_bases ATGAAATTTTTTAAACCAACGGAACCCGTATTAACTAGGGGTAAACTTGAAAAATCAATTATGGTAGATGGTACGGTACA TTTACAAGGTTGGGTAACATCCTTCGAGCAGAAAAAATTAGATGGAATGCTAGTTTCTATCGCTGGCCAGGAATTTAGAA ACATTGAATTAACCTACAACTTACCTTCTCCAGGGGTCAAAAAAAAATATCCCTACATTCCAGGAACGGAAAAAGCTAGA TACCAGATCCGAATACCTCTGACAAAGCAACAGCAAAAGCAATTTAAAAATTCTTTGGTTTTGTTAACTCCCTCATTAGA TGGGCAACCTGGTGGAATAATGACGAACGCTTTAGAACCCTCTTTGCCTATTCCTCCTCATGAATACATTAAGTTTGTAG GGGGGCATTTTACAGATGTGGGTTTCAACTTTCTCGGTTATTAG
Upstream 100 bases:
>100_bases ATCAATTAAAATGGTGTATAAATTCAAAAGAAGCGATCGCTCACCTCTTCAATGTGTCAAAAAATCATAAATAACAACCA ACAACTAACAAGCAACAAAA
Downstream 100 bases:
>100_bases ATCCAAATGGTAGGTTTGGAACCGACGGACAAAGTCTTAGATATTGGTTGCGGTGTAGGCCGCATTGCTTATCCTTTAAC CTATTATCTAAAAGATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKFFKPTEPVLTRGKLEKSIMVDGTVHLQGWVTSFEQKKLDGMLVSIAGQEFRNIELTYNLPSPGVKKKYPYIPGTEKAR YQIRIPLTKQQQKQFKNSLVLLTPSLDGQPGGIMTNALEPSLPIPPHEYIKFVGGHFTDVGFNFLGY
Sequences:
>Translated_147_residues MKFFKPTEPVLTRGKLEKSIMVDGTVHLQGWVTSFEQKKLDGMLVSIAGQEFRNIELTYNLPSPGVKKKYPYIPGTEKAR YQIRIPLTKQQQKQFKNSLVLLTPSLDGQPGGIMTNALEPSLPIPPHEYIKFVGGHFTDVGFNFLGY >Mature_147_residues MKFFKPTEPVLTRGKLEKSIMVDGTVHLQGWVTSFEQKKLDGMLVSIAGQEFRNIELTYNLPSPGVKKKYPYIPGTEKAR YQIRIPLTKQQQKQFKNSLVLLTPSLDGQPGGIMTNALEPSLPIPPHEYIKFVGGHFTDVGFNFLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16584; Mature: 16584
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFKPTEPVLTRGKLEKSIMVDGTVHLQGWVTSFEQKKLDGMLVSIAGQEFRNIELTYN CCCCCCCCCHHHCCCCCCEEEECCEEEEEHHHHHHHHHHHCCEEEEECCCCCCEEEEEEE LPSPGVKKKYPYIPGTEKARYQIRIPLTKQQQKQFKNSLVLLTPSLDGQPGGIMTNALEP CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCEEECCCCC SLPIPPHEYIKFVGGHFTDVGFNFLGY CCCCCHHHHHHHHCCCCCCCCEEECCC >Mature Secondary Structure MKFFKPTEPVLTRGKLEKSIMVDGTVHLQGWVTSFEQKKLDGMLVSIAGQEFRNIELTYN CCCCCCCCCHHHCCCCCCEEEECCEEEEEHHHHHHHHHHHCCEEEEECCCCCCEEEEEEE LPSPGVKKKYPYIPGTEKARYQIRIPLTKQQQKQFKNSLVLLTPSLDGQPGGIMTNALEP CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCEEECCCCC SLPIPPHEYIKFVGGHFTDVGFNFLGY CCCCCHHHHHHHHCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA