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The map label for this gene is 113475146

Identifier: 113475146

GI number: 113475146

Start: 2177667

End: 2179061

Strand: Reverse

Name: 113475146

Synonym: Tery_1440

Alternate gene names: NA

Gene position: 2179061-2177667 (Counterclockwise)

Preceding gene: 113475147

Following gene: 113475144

Centisome position: 28.12

GC content: 31.04

Gene sequence:

>1395_bases
ATGGACATTGACACATTAGTAGAATTAGCAGACAATTTAATATTCACCAAAACTAGAGAACATTTAACCTCTCTACAAAA
GGAAGTATTAAAAGGTACTTTAAATGGTAAAAAATACCCCCAAATAGCAGATGATTGTCAACGTCATCCCGACCATATCA
AACAGGTAGGTACAAAATTATGGAAACTTCTTTCGGATATTTTAGGAAAAAATATCAAAAAATCTAATGCTCGTTCCATA
TTAGAAAAAATCCACTTTTCACATATTTCAAATACAGGTGATGACTGCGTAAATATTAATAGTAATCATATAAATATCTG
TGGAGAAAACAAACAATCTCCCACCCCTAAAAACAAATCTTCCCCCACTCTCATTGACCAAAACCAAGACAACACTAACC
CAGAAAATTATTATGATTTATCTGAAGCTCCTGATTTATATCCCCTGTGCGATCGCCACTCCGAAGTTACCACCCTCAAA
CAATTGATACTACAAAATCACAGCCGCATCATCACCATATTAGGATTAACTGGCATCGGCAAAAGTACTCTCACTGTAGA
ATTAATTGCACAAATAAAAAATAAATTTGATTATATAATCTGGCGCAATATTGACAACTACTCCTCCTGTGAATCTCTAC
AAATAAACATTCTTAAATTTTTATCTCAAACAGATTTTACATCCCAAAAAAAAGAAAAAATTTCTAAGTCTCAAACCATC
AACAATCAATTAATAGATTACCTCCGGAAATATCGTTGTTTACTTATTTTTGATAATTTACAAGAAATTTTTGCTAGTGG
AAAACTAGCTGGTACTTATCTGCAAGAACATGAAAATTATGGTAAATTTTTCCAACAAATAGCTACATTATCTCATCAAA
GTTGTTTGTTACTTCTGAGTCAAGAAAAACCAAAAATAATATCAACTAATAATCATTGTCAGACTTTAAAAATTGATGGT
TTAGGAAAGTCAGCAGTAGCAATTTTAAAAGATATAAACTTAACAGATGAAGAGCAATCCTTAGAGTTGATTAATCTCTA
TAGCGGAAATCCTTTGTGGTTAAATATTATTGCTGATGCGGTCGAAGATTTATTTAATGGAAATATAGCTCAAATTTTAT
CTTGCCCTAGTATATATTTAGGAGATTTAGAACCGATATTAGACAAATATTTTCAGCGTTTGTCAGAGCTAGAAAAGCAA
GTAATATTATGGATGGCAAGTCAAGAAACAGCAGTAGATATTTATAATACTTCCCCAGACTTTCCACTTTTACACTCAGA
TTTATGGAAAGGAATACAATCATTAAAAAGACGTTGTTTAGTAACAAAACAAGATAATTTATTTGCTGTTTTAGCTGTGC
TGAAGCAGTATATAATATCAAATTATTTGCATTAA

Upstream 100 bases:

>100_bases
AACTAATTTATTGTTAAAAAGTGCTATTTAATTTTTCCAGTGATAAAAAGTGTGATAAAGTCATACGAGGCATAACTAAA
CTACCAATCTACCTGTAGCT

Downstream 100 bases:

>100_bases
CTAGTTTTAATTCTCTAGAATACTATCTAGCTATAGCAATCCTATAATTGCTTGTGGCAAAATTCTATACTGAAAAAGTT
TAGGAAAATCAAATATTTGA

Product: WD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MDIDTLVELADNLIFTKTREHLTSLQKEVLKGTLNGKKYPQIADDCQRHPDHIKQVGTKLWKLLSDILGKNIKKSNARSI
LEKIHFSHISNTGDDCVNINSNHINICGENKQSPTPKNKSSPTLIDQNQDNTNPENYYDLSEAPDLYPLCDRHSEVTTLK
QLILQNHSRIITILGLTGIGKSTLTVELIAQIKNKFDYIIWRNIDNYSSCESLQINILKFLSQTDFTSQKKEKISKSQTI
NNQLIDYLRKYRCLLIFDNLQEIFASGKLAGTYLQEHENYGKFFQQIATLSHQSCLLLLSQEKPKIISTNNHCQTLKIDG
LGKSAVAILKDINLTDEEQSLELINLYSGNPLWLNIIADAVEDLFNGNIAQILSCPSIYLGDLEPILDKYFQRLSELEKQ
VILWMASQETAVDIYNTSPDFPLLHSDLWKGIQSLKRRCLVTKQDNLFAVLAVLKQYIISNYLH

Sequences:

>Translated_464_residues
MDIDTLVELADNLIFTKTREHLTSLQKEVLKGTLNGKKYPQIADDCQRHPDHIKQVGTKLWKLLSDILGKNIKKSNARSI
LEKIHFSHISNTGDDCVNINSNHINICGENKQSPTPKNKSSPTLIDQNQDNTNPENYYDLSEAPDLYPLCDRHSEVTTLK
QLILQNHSRIITILGLTGIGKSTLTVELIAQIKNKFDYIIWRNIDNYSSCESLQINILKFLSQTDFTSQKKEKISKSQTI
NNQLIDYLRKYRCLLIFDNLQEIFASGKLAGTYLQEHENYGKFFQQIATLSHQSCLLLLSQEKPKIISTNNHCQTLKIDG
LGKSAVAILKDINLTDEEQSLELINLYSGNPLWLNIIADAVEDLFNGNIAQILSCPSIYLGDLEPILDKYFQRLSELEKQ
VILWMASQETAVDIYNTSPDFPLLHSDLWKGIQSLKRRCLVTKQDNLFAVLAVLKQYIISNYLH
>Mature_464_residues
MDIDTLVELADNLIFTKTREHLTSLQKEVLKGTLNGKKYPQIADDCQRHPDHIKQVGTKLWKLLSDILGKNIKKSNARSI
LEKIHFSHISNTGDDCVNINSNHINICGENKQSPTPKNKSSPTLIDQNQDNTNPENYYDLSEAPDLYPLCDRHSEVTTLK
QLILQNHSRIITILGLTGIGKSTLTVELIAQIKNKFDYIIWRNIDNYSSCESLQINILKFLSQTDFTSQKKEKISKSQTI
NNQLIDYLRKYRCLLIFDNLQEIFASGKLAGTYLQEHENYGKFFQQIATLSHQSCLLLLSQEKPKIISTNNHCQTLKIDG
LGKSAVAILKDINLTDEEQSLELINLYSGNPLWLNIIADAVEDLFNGNIAQILSCPSIYLGDLEPILDKYFQRLSELEKQ
VILWMASQETAVDIYNTSPDFPLLHSDLWKGIQSLKRRCLVTKQDNLFAVLAVLKQYIISNYLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 52908; Mature: 52908

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDTLVELADNLIFTKTREHLTSLQKEVLKGTLNGKKYPQIADDCQRHPDHIKQVGTKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH
WKLLSDILGKNIKKSNARSILEKIHFSHISNTGDDCVNINSNHINICGENKQSPTPKNKS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCCC
SPTLIDQNQDNTNPENYYDLSEAPDLYPLCDRHSEVTTLKQLILQNHSRIITILGLTGIG
CCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
KSTLTVELIAQIKNKFDYIIWRNIDNYSSCESLQINILKFLSQTDFTSQKKEKISKSQTI
CHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NNQLIDYLRKYRCLLIFDNLQEIFASGKLAGTYLQEHENYGKFFQQIATLSHQSCLLLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE
QEKPKIISTNNHCQTLKIDGLGKSAVAILKDINLTDEEQSLELINLYSGNPLWLNIIADA
CCCCCEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHCCEEEEEECCCCEEHHHHHHH
VEDLFNGNIAQILSCPSIYLGDLEPILDKYFQRLSELEKQVILWMASQETAVDIYNTSPD
HHHHHCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
FPLLHSDLWKGIQSLKRRCLVTKQDNLFAVLAVLKQYIISNYLH
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIDTLVELADNLIFTKTREHLTSLQKEVLKGTLNGKKYPQIADDCQRHPDHIKQVGTKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH
WKLLSDILGKNIKKSNARSILEKIHFSHISNTGDDCVNINSNHINICGENKQSPTPKNKS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCCC
SPTLIDQNQDNTNPENYYDLSEAPDLYPLCDRHSEVTTLKQLILQNHSRIITILGLTGIG
CCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
KSTLTVELIAQIKNKFDYIIWRNIDNYSSCESLQINILKFLSQTDFTSQKKEKISKSQTI
CHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NNQLIDYLRKYRCLLIFDNLQEIFASGKLAGTYLQEHENYGKFFQQIATLSHQSCLLLLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE
QEKPKIISTNNHCQTLKIDGLGKSAVAILKDINLTDEEQSLELINLYSGNPLWLNIIADA
CCCCCEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHCCEEEEEECCCCEEHHHHHHH
VEDLFNGNIAQILSCPSIYLGDLEPILDKYFQRLSELEKQVILWMASQETAVDIYNTSPD
HHHHHCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC
FPLLHSDLWKGIQSLKRRCLVTKQDNLFAVLAVLKQYIISNYLH
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]