Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475135

Identifier: 113475135

GI number: 113475135

Start: 2160042

End: 2160473

Strand: Reverse

Name: 113475135

Synonym: Tery_1427

Alternate gene names: NA

Gene position: 2160473-2160042 (Counterclockwise)

Preceding gene: 113475136

Following gene: 113475134

Centisome position: 27.88

GC content: 34.03

Gene sequence:

>432_bases
ATGGGAGAAAACTACACTAATAATCTAGTCACTCGACTTATTTCAGAATTAAAACCTCGTTGTTTAGCAATGACCGGAGT
TTGTGCAGGTAATAAAAAAAAGACTTTTTTAGGTGATGTAATTGTTGCAAATCGAGTCTTTAAATTTGACTATGGTAAAC
TTGTTACTCATTACGAATCAATAGGTGATAAACAAATTTTTACTGAAGAAATATTCCATGATATTCGCACTTATAACTTG
AAACGCCAATGGGAATTTATCATTCAAGAATTTCCCCAAGATTGGCTAAATACTATTCAAACTCCTAGACCAAAATCTGA
CTATCATCAAGAACGTTGGTTACTCCACAAACTCTATGATTTTAAACAACAACCATACAAATATTCACGTCCTGACCAGC
ACCCAGAAAGACCAACAGAATGCCCAGATTAG

Upstream 100 bases:

>100_bases
ATATAAAGAGTTTAATTGATAATGTAATAAATATAGATTTATTATCAAAACTTAGATATATGGTACGCGATTAAATATAG
CAGCAGCTCGTCCTGTAGAA

Downstream 100 bases:

>100_bases
AGAAAAGTAATTCAACAATTAAGAGAAAAAGAATTATTAAAAACAGACTCCTTGGAATTAACCGAAAAAGCTCAGAAAGA
AATTAACAATGAACGACTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleoside Phosphorylase-Like; WD Repeat-Containing Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNL
KRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD

Sequences:

>Translated_143_residues
MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNL
KRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD
>Mature_142_residues
GENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNLK
RQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17187; Mature: 17056

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYES
CCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGDKQIFTEEIFHDIRTYNLKRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYD
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FKQQPYKYSRPDQHPERPTECPD
HHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYES
CCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGDKQIFTEEIFHDIRTYNLKRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYD
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FKQQPYKYSRPDQHPERPTECPD
HHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA