Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is nanE [H]

Identifier: 113475125

GI number: 113475125

Start: 2144836

End: 2145510

Strand: Reverse

Name: nanE [H]

Synonym: Tery_1417

Alternate gene names: 113475125

Gene position: 2145510-2144836 (Counterclockwise)

Preceding gene: 113475126

Following gene: 113475124

Centisome position: 27.68

GC content: 38.96

Gene sequence:

>675_bases
ATGACTAACAAACATCCTAATCTACTATTACCAAAAGGCTTAATAGTTTCTTGTCAAGCTCCTACGAACTCCCCTTTACA
TCATCCAGAAGTAATTGCAGCTATGGCACAAGCATCTATAAATCAAGGTGCAGTGGGAGTCAGAATAGACACTCCATCAC
ATATTCGGGCAGTGCGACAGAGAATTACTCAACCTATCATTGGTTTGTGGAAGCAACAAGTACCAGGCTTTGAAGTTTAT
ATTACACCCCGTTTATCAGATGCAGAAGCGATCGCTCAAGTTGGAGCAGATATTATTGCTATTGATGGTACTCTCAGAAG
ACGTCCGGATGGAGCAACTTTAGCAACATTAATTAATTTCATCCACAATGAATTGGGAAAACCAGTAATGGCAGATGTGG
ATACTATAGAAGTAGCAAAAGTAGCAGTGGCAGCAGGTGCAGATTTTATTGCTACTACTCTGTATGGTTATACTGAGGAA
ACTAAAACAGAATCTCCCCCTGGCTTTGAACTATTAAAGCAGATGGTAAAAAAAATAGCAGTTCCGGCAATTTGTGAAGG
TGGAATTGCTTCTCCAGCAATGACAAAAAAAGCTATAGATTTAGGAGCTTATGCTGTTGTTGTAGGTACAGATATTACAG
GAATTGATAGTAAAGTTAAGGCTTATACAAGTTAA

Upstream 100 bases:

>100_bases
TTTTGGCCATTGTACTGATTAGTAGTGAGTACTACAAGCTTATGTTTAAGCGGTACTAGAACGGAGAGAGAAAAGACCAA
AATCAAAGCTATTTTTAATT

Downstream 100 bases:

>100_bases
TACTTCTGGTGTATGTGTCCTAACTCGTCTCTTTCAAAGAGAGGGGTTCAATTCCCCTTTCCTTTCCAAAGAAGGTAGTC
GGGAGGTTAGGTTTCACCAA

Product: N-acetylmannosamine-6-phosphate 2-epimerase

Products: NA

Alternate protein names: ManNAc-6-P epimerase [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTNKHPNLLLPKGLIVSCQAPTNSPLHHPEVIAAMAQASINQGAVGVRIDTPSHIRAVRQRITQPIIGLWKQQVPGFEVY
ITPRLSDAEAIAQVGADIIAIDGTLRRRPDGATLATLINFIHNELGKPVMADVDTIEVAKVAVAAGADFIATTLYGYTEE
TKTESPPGFELLKQMVKKIAVPAICEGGIASPAMTKKAIDLGAYAVVVGTDITGIDSKVKAYTS

Sequences:

>Translated_224_residues
MTNKHPNLLLPKGLIVSCQAPTNSPLHHPEVIAAMAQASINQGAVGVRIDTPSHIRAVRQRITQPIIGLWKQQVPGFEVY
ITPRLSDAEAIAQVGADIIAIDGTLRRRPDGATLATLINFIHNELGKPVMADVDTIEVAKVAVAAGADFIATTLYGYTEE
TKTESPPGFELLKQMVKKIAVPAICEGGIASPAMTKKAIDLGAYAVVVGTDITGIDSKVKAYTS
>Mature_223_residues
TNKHPNLLLPKGLIVSCQAPTNSPLHHPEVIAAMAQASINQGAVGVRIDTPSHIRAVRQRITQPIIGLWKQQVPGFEVYI
TPRLSDAEAIAQVGADIIAIDGTLRRRPDGATLATLINFIHNELGKPVMADVDTIEVAKVAVAAGADFIATTLYGYTEET
KTESPPGFELLKQMVKKIAVPAICEGGIASPAMTKKAIDLGAYAVVVGTDITGIDSKVKAYTS

Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]

COG id: COG3010

COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nanE family [H]

Homologues:

Organism=Escherichia coli, GI1789617, Length=212, Percent_Identity=40.5660377358491, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007260
- InterPro:   IPR011060 [H]

Pfam domain/function: PF04131 NanE [H]

EC number: =5.1.3.9 [H]

Molecular weight: Translated: 23743; Mature: 23612

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKHPNLLLPKGLIVSCQAPTNSPLHHPEVIAAMAQASINQGAVGVRIDTPSHIRAVRQ
CCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
RITQPIIGLWKQQVPGFEVYITPRLSDAEAIAQVGADIIAIDGTLRRRPDGATLATLINF
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHH
IHNELGKPVMADVDTIEVAKVAVAAGADFIATTLYGYTEETKTESPPGFELLKQMVKKIA
HHHHHCCCEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
VPAICEGGIASPAMTKKAIDLGAYAVVVGTDITGIDSKVKAYTS
CCHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCC
>Mature Secondary Structure 
TNKHPNLLLPKGLIVSCQAPTNSPLHHPEVIAAMAQASINQGAVGVRIDTPSHIRAVRQ
CCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
RITQPIIGLWKQQVPGFEVYITPRLSDAEAIAQVGADIIAIDGTLRRRPDGATLATLINF
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHH
IHNELGKPVMADVDTIEVAKVAVAAGADFIATTLYGYTEETKTESPPGFELLKQMVKKIA
HHHHHCCCEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
VPAICEGGIASPAMTKKAIDLGAYAVVVGTDITGIDSKVKAYTS
CCHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]