| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475119
Identifier: 113475119
GI number: 113475119
Start: 2139381
End: 2139662
Strand: Direct
Name: 113475119
Synonym: Tery_1409
Alternate gene names: NA
Gene position: 2139381-2139662 (Clockwise)
Preceding gene: 113475115
Following gene: 113475120
Centisome position: 27.6
GC content: 43.97
Gene sequence:
>282_bases ATGGAGATGTCTATTTGGCTTAAGCGCGAAAGGAAAAACAACACTCATAAGTTTCTTCAGTCACAGGCTATTGTTTGGAG GCTATCCGTAATTGCACGTCGCTACAACCAGCAGGGTAAAGAAGGATTGGTAGATCGTCGCCATCAACATCCAGGTCCAA AAGGATTCCTCTGTGATGAACGACAAGCTCAACTGGAAATAGCTCTCCAGGAGAAAGCTCCCGATGGAGGATTAGGTCAT GGTCGCAAGGTAGGAGATTTGTTAACAGAATTAATTAATTGA
Upstream 100 bases:
>100_bases AGGATATTTCTGAATATAGCCCCAAGTATAACTCTCCATCTGTTGTTTTAAAAATTTATTGTGAAATTTATTATACCATC TTTTTGGATTTGATTCAATT
Downstream 100 bases:
>100_bases TTATCAAATTAATCGGCGCAGGGGATGGAAATATTTACGCTCAATGAGATATAGATTATGAATCCCTCGGCCTGAGCATA ACAAATGAGCAACCCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MEMSIWLKRERKNNTHKFLQSQAIVWRLSVIARRYNQQGKEGLVDRRHQHPGPKGFLCDERQAQLEIALQEKAPDGGLGH GRKVGDLLTELIN
Sequences:
>Translated_93_residues MEMSIWLKRERKNNTHKFLQSQAIVWRLSVIARRYNQQGKEGLVDRRHQHPGPKGFLCDERQAQLEIALQEKAPDGGLGH GRKVGDLLTELIN >Mature_93_residues MEMSIWLKRERKNNTHKFLQSQAIVWRLSVIARRYNQQGKEGLVDRRHQHPGPKGFLCDERQAQLEIALQEKAPDGGLGH GRKVGDLLTELIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10742; Mature: 10742
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMSIWLKRERKNNTHKFLQSQAIVWRLSVIARRYNQQGKEGLVDRRHQHPGPKGFLCDE CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC RQAQLEIALQEKAPDGGLGHGRKVGDLLTELIN CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure MEMSIWLKRERKNNTHKFLQSQAIVWRLSVIARRYNQQGKEGLVDRRHQHPGPKGFLCDE CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC RQAQLEIALQEKAPDGGLGHGRKVGDLLTELIN CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA