| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475120
Identifier: 113475120
GI number: 113475120
Start: 2140838
End: 2140963
Strand: Direct
Name: 113475120
Synonym: Tery_1411
Alternate gene names: NA
Gene position: 2140838-2140963 (Clockwise)
Preceding gene: 113475119
Following gene: 113475123
Centisome position: 27.62
GC content: 34.92
Gene sequence:
>126_bases TTGACTGTTCACAAAACTGTTGAAATAGAAAGACTAGCTGCCTGTTTTCCTTTACCAATTAAATATGAGAGTCGCCGGAA ACATATACAAAAGACATCTCCAAAAATACTCAAACGCTTATCCTAA
Upstream 100 bases:
>100_bases TAGACCGACCCCAATGGATTTTTTTTCATTATCTGAGTCAGATTTTCAATAATCTTTGACTGAAGGTCAATTCCAAACTT GAAAAATTTTAGTTTGGTTA
Downstream 100 bases:
>100_bases CTATCTTTAGTGGTGCTATCGCTACTTATGAAGATAGTTAATTTGTACAGTTTTATGGGCATCAGAGATACTTCGTGTTA CTAATTCAAATATTTATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MTVHKTVEIERLAACFPLPIKYESRRKHIQKTSPKILKRLS
Sequences:
>Translated_41_residues MTVHKTVEIERLAACFPLPIKYESRRKHIQKTSPKILKRLS >Mature_40_residues TVHKTVEIERLAACFPLPIKYESRRKHIQKTSPKILKRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4848; Mature: 4717
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVHKTVEIERLAACFPLPIKYESRRKHIQKTSPKILKRLS CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHCC >Mature Secondary Structure TVHKTVEIERLAACFPLPIKYESRRKHIQKTSPKILKRLS CCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA