Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475118

Identifier: 113475118

GI number: 113475118

Start: 2138782

End: 2139186

Strand: Reverse

Name: 113475118

Synonym: Tery_1408

Alternate gene names: NA

Gene position: 2139186-2138782 (Counterclockwise)

Preceding gene: 113475121

Following gene: 113475117

Centisome position: 27.6

GC content: 30.12

Gene sequence:

>405_bases
TTGAAAAAACAAAAATCAGAATTAATCAACCAGGAAGTGGGAATAATCCGATCATTATCATTTCTAGAACAAATTGTTCT
CATGTTAGTTTATCTAAGACATAATATAAGTTTTCAACTTTTAGGACTTATCTTTCAAGTAAGTGAGTCGACGGCTCATA
ATATATTTACATATTGGCAAAAACTTTGTGAAGGAGAGTTACCACCAAGCTTGTTAGAACAAGTAAAAAAGTTTCAAGAA
GAAGAGAGCATTCTTGAACTGTTAACCGATTATGAATTAATTGTATACATTGCTGAACAACCAATTGAAAGACCTTCTGA
CTATCAAGAACAAAAACAATATTATTCAGGAAAACATCCAAAGAAATACTCGAAAAAGTCAATTTATTATCTTACCAAAA
GCTGA

Upstream 100 bases:

>100_bases
TATCCTAAACAGACAAAAAGATTATTAGGAATCGACTACAAGCAACTAGAACAATTAATAGACCAGAGAAAATTACTCAA
TCAGAAAAATTAAGAAGAAA

Downstream 100 bases:

>100_bases
AGATGTTATTGATGTAGTAATTGGAAAACCTGGACCAATGAGTGATATTAAAATCTGTCGCCAAACTTTAAATAAATTCA
AGACAAACCAAACTTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKQKSELINQEVGIIRSLSFLEQIVLMLVYLRHNISFQLLGLIFQVSESTAHNIFTYWQKLCEGELPPSLLEQVKKFQE
EESILELLTDYELIVYIAEQPIERPSDYQEQKQYYSGKHPKKYSKKSIYYLTKS

Sequences:

>Translated_134_residues
MKKQKSELINQEVGIIRSLSFLEQIVLMLVYLRHNISFQLLGLIFQVSESTAHNIFTYWQKLCEGELPPSLLEQVKKFQE
EESILELLTDYELIVYIAEQPIERPSDYQEQKQYYSGKHPKKYSKKSIYYLTKS
>Mature_134_residues
MKKQKSELINQEVGIIRSLSFLEQIVLMLVYLRHNISFQLLGLIFQVSESTAHNIFTYWQKLCEGELPPSLLEQVKKFQE
EESILELLTDYELIVYIAEQPIERPSDYQEQKQYYSGKHPKKYSKKSIYYLTKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15913; Mature: 15913

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQKSELINQEVGIIRSLSFLEQIVLMLVYLRHNISFQLLGLIFQVSESTAHNIFTYWQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KLCEGELPPSLLEQVKKFQEEESILELLTDYELIVYIAEQPIERPSDYQEQKQYYSGKHP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
KKYSKKSIYYLTKS
CCCCCCEEEEEECC
>Mature Secondary Structure
MKKQKSELINQEVGIIRSLSFLEQIVLMLVYLRHNISFQLLGLIFQVSESTAHNIFTYWQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KLCEGELPPSLLEQVKKFQEEESILELLTDYELIVYIAEQPIERPSDYQEQKQYYSGKHP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
KKYSKKSIYYLTKS
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA