| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475121
Identifier: 113475121
GI number: 113475121
Start: 2141101
End: 2141295
Strand: Reverse
Name: 113475121
Synonym: Tery_1412
Alternate gene names: NA
Gene position: 2141295-2141101 (Counterclockwise)
Preceding gene: 113475122
Following gene: 113475118
Centisome position: 27.63
GC content: 24.62
Gene sequence:
>195_bases ATGCCGCTAGAAATCAAAGAAGAAAATCAAGAAAAAGCCAGAAAGAGAATATTTGTAGAACATATAATAAGATTAATTAA AATATTTAGAATTGCTAGAGAAAGATTCAGATTAAAAGATAATAATTATCAAAAAGTAATCTTAACAATATGTGGTTTAG TGCGACTAAGAATTGGCTCTTTTATATTAGTATAA
Upstream 100 bases:
>100_bases ACAGGATAAATTTGATAAAAAACAAAAATTTTAAGGAGATAAAGCTTATGAAGGAATAGAAAGAACTACCACACCAAAAA AGAAACCAAGAAAAAAAGAA
Downstream 100 bases:
>100_bases ACCATCAAAAGCTGAGATAAAAATAATAAATTAAAGTACAATAAATATTTGAATTAGTAACACGAAGTATCTCTGATGCC CATAAAACTGTACAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MPLEIKEENQEKARKRIFVEHIIRLIKIFRIARERFRLKDNNYQKVILTICGLVRLRIGSFILV
Sequences:
>Translated_64_residues MPLEIKEENQEKARKRIFVEHIIRLIKIFRIARERFRLKDNNYQKVILTICGLVRLRIGSFILV >Mature_63_residues PLEIKEENQEKARKRIFVEHIIRLIKIFRIARERFRLKDNNYQKVILTICGLVRLRIGSFILV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7780; Mature: 7648
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLEIKEENQEKARKRIFVEHIIRLIKIFRIARERFRLKDNNYQKVILTICGLVRLRIGS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FILV HHCC >Mature Secondary Structure PLEIKEENQEKARKRIFVEHIIRLIKIFRIARERFRLKDNNYQKVILTICGLVRLRIGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FILV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA