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The map label for this gene is speA [H]

Identifier: 113475093

GI number: 113475093

Start: 2099242

End: 2100564

Strand: Reverse

Name: speA [H]

Synonym: Tery_1369

Alternate gene names: 113475093

Gene position: 2100564-2099242 (Counterclockwise)

Preceding gene: 113475102

Following gene: 113475092

Centisome position: 27.1

GC content: 39.61

Gene sequence:

>1323_bases
ATGAATCAAGTATCTTCTACCTATAAGCTGATTGCATCCCACAATCAGGATATTCAGATTAGCCTCTATACTCCTGCTCA
TCAAGGTATTAAAAGTAATGGTCATCGTCTGAGTGCAGAAATTTACCAATATGATGCACCATTTCTGACTCGTCCTCGTA
CTGAAAATATAGAGAAGCATTTCTCTAAGCTGTATGGTACAAAACATACTTTCTGGCTCACAGCAGGAGGTAGTCAAGGA
GTTTTAACCACTTGTGCTTTACTAGGTACTCAGTATAAAAAAGTGGCGATCGCCCTCAATAGTCATATTTCCACTATAAA
CGGCATCATCTTAGCAGGATTAGAGCCTTATTTTATTGATTCTGAGTCGCTGATGCCTACTACTGATGAGGTAATTACGG
CTTTAGAAACGAGTGGCGTATCAGCACTGTTACTAACTCATCCAAGTTATGAAGGGGTAACTATCGAGCTTGCCACCATC
GCTAATTATTGTCAGAAGCATGGGATAGCTCTAGCAGTAGATGAAGCTCACGGTAGTCATTTTCCCTTTCTTGACGAACA
ATGGCAATCGGCAATTAGTGTTGGTGCAGATATAGTTTCCCATAGTATGCACAAATATGCCGGAAGTTTAGTACAAACTG
GTTTGTTACATTTACCTAAATCTTCCCAGTTTAGCACCGAACAAGTGATGGGGGTTTTACCTTTGTTTGAAACTACTACC
CGCAGTAATTTGTTGATGCTGAGTCTTGAAGATGCTATTAAAAGGGGGTATTCTGAATCAGGCAAGGCTTTATTTGACAA
AGCTATTCAAGAGTGCGACCTCCTGCGTAGTCAGTTAGATAGTTATGGTCAGGTTTTAACTTACGATCCTCAAGTTACCG
ATCCTCTGAAAATTTATTTAAAGAGCGATCGCATGACAGGGGAAGAGTTAGCAGAATTTTTGTATGAATATGGCATAGAT
GGGGAATTTGCAGGAGAGGAGGGATTATTATTAATTTTCTCTTTTCATCACAATCCACAGGATTTCCAATTTATGCGGGA
AACTCTGGCTAAAGTTGTAGCAATTTTGAGGGAAAAACCCATAAAACAGATTGTACCTGACAGTTACTTTTCCCGTCGCC
CTCAAATAAATACTTTACCTAAAGATGCTTTCTTTTGCCGGAAAGAAAAGTTACCCATTGGGGAAGTATTAGGTAAAATT
AGTAGTTGTTGGATTAAGAAAGTTCCCCCAGGGAGTCCGATTTTGATACCAGGAGAAGAAGTAACTAATTGGCACATAGA
ACGTTTATCTCCTGATACTGTTGTTGAAGTAGTAGGTGCGTAA

Upstream 100 bases:

>100_bases
ATGGAAGCGACAGGATTACTGTTAGCTTTACGGAATGGGATTACGATAGAAAGTACAATTCGCCCCATACCACAACTTAA
GCCAATTTTGCTGTAAATTG

Downstream 100 bases:

>100_bases
TTAAAAATGGTCGAAGAACAATCCAAAGATTTCTTAGAAGCAAGACCTTGGTTATCAGGGATTTGTGATACTCAAAGCAC
TGAGGAATTAAAAAATAAGT

Product: Orn/Lys/Arg decarboxylase, major region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNQVSSTYKLIASHNQDIQISLYTPAHQGIKSNGHRLSAEIYQYDAPFLTRPRTENIEKHFSKLYGTKHTFWLTAGGSQG
VLTTCALLGTQYKKVAIALNSHISTINGIILAGLEPYFIDSESLMPTTDEVITALETSGVSALLLTHPSYEGVTIELATI
ANYCQKHGIALAVDEAHGSHFPFLDEQWQSAISVGADIVSHSMHKYAGSLVQTGLLHLPKSSQFSTEQVMGVLPLFETTT
RSNLLMLSLEDAIKRGYSESGKALFDKAIQECDLLRSQLDSYGQVLTYDPQVTDPLKIYLKSDRMTGEELAEFLYEYGID
GEFAGEEGLLLIFSFHHNPQDFQFMRETLAKVVAILREKPIKQIVPDSYFSRRPQINTLPKDAFFCRKEKLPIGEVLGKI
SSCWIKKVPPGSPILIPGEEVTNWHIERLSPDTVVEVVGA

Sequences:

>Translated_440_residues
MNQVSSTYKLIASHNQDIQISLYTPAHQGIKSNGHRLSAEIYQYDAPFLTRPRTENIEKHFSKLYGTKHTFWLTAGGSQG
VLTTCALLGTQYKKVAIALNSHISTINGIILAGLEPYFIDSESLMPTTDEVITALETSGVSALLLTHPSYEGVTIELATI
ANYCQKHGIALAVDEAHGSHFPFLDEQWQSAISVGADIVSHSMHKYAGSLVQTGLLHLPKSSQFSTEQVMGVLPLFETTT
RSNLLMLSLEDAIKRGYSESGKALFDKAIQECDLLRSQLDSYGQVLTYDPQVTDPLKIYLKSDRMTGEELAEFLYEYGID
GEFAGEEGLLLIFSFHHNPQDFQFMRETLAKVVAILREKPIKQIVPDSYFSRRPQINTLPKDAFFCRKEKLPIGEVLGKI
SSCWIKKVPPGSPILIPGEEVTNWHIERLSPDTVVEVVGA
>Mature_440_residues
MNQVSSTYKLIASHNQDIQISLYTPAHQGIKSNGHRLSAEIYQYDAPFLTRPRTENIEKHFSKLYGTKHTFWLTAGGSQG
VLTTCALLGTQYKKVAIALNSHISTINGIILAGLEPYFIDSESLMPTTDEVITALETSGVSALLLTHPSYEGVTIELATI
ANYCQKHGIALAVDEAHGSHFPFLDEQWQSAISVGADIVSHSMHKYAGSLVQTGLLHLPKSSQFSTEQVMGVLPLFETTT
RSNLLMLSLEDAIKRGYSESGKALFDKAIQECDLLRSQLDSYGQVLTYDPQVTDPLKIYLKSDRMTGEELAEFLYEYGID
GEFAGEEGLLLIFSFHHNPQDFQFMRETLAKVVAILREKPIKQIVPDSYFSRRPQINTLPKDAFFCRKEKLPIGEVLGKI
SSCWIKKVPPGSPILIPGEEVTNWHIERLSPDTVVEVVGA

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 48895; Mature: 48895

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVSSTYKLIASHNQDIQISLYTPAHQGIKSNGHRLSAEIYQYDAPFLTRPRTENIEKH
CCCHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHH
FSKLYGTKHTFWLTAGGSQGVLTTCALLGTQYKKVAIALNSHISTINGIILAGLEPYFID
HHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHEEEEEEHHHHHHHCCEEEECCCCEEEC
SESLMPTTDEVITALETSGVSALLLTHPSYEGVTIELATIANYCQKHGIALAVDEAHGSH
CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCC
FPFLDEQWQSAISVGADIVSHSMHKYAGSLVQTGLLHLPKSSQFSTEQVMGVLPLFETTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
RSNLLMLSLEDAIKRGYSESGKALFDKAIQECDLLRSQLDSYGQVLTYDPQVTDPLKIYL
CCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEE
KSDRMTGEELAEFLYEYGIDGEFAGEEGLLLIFSFHHNPQDFQFMRETLAKVVAILREKP
ECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
IKQIVPDSYFSRRPQINTLPKDAFFCRKEKLPIGEVLGKISSCWIKKVPPGSPILIPGEE
HHHHCCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCEEECCCH
VTNWHIERLSPDTVVEVVGA
HCCEEHCCCCCCHHHHCCCC
>Mature Secondary Structure
MNQVSSTYKLIASHNQDIQISLYTPAHQGIKSNGHRLSAEIYQYDAPFLTRPRTENIEKH
CCCHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHH
FSKLYGTKHTFWLTAGGSQGVLTTCALLGTQYKKVAIALNSHISTINGIILAGLEPYFID
HHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHEEEEEEHHHHHHHCCEEEECCCCEEEC
SESLMPTTDEVITALETSGVSALLLTHPSYEGVTIELATIANYCQKHGIALAVDEAHGSH
CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCC
FPFLDEQWQSAISVGADIVSHSMHKYAGSLVQTGLLHLPKSSQFSTEQVMGVLPLFETTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
RSNLLMLSLEDAIKRGYSESGKALFDKAIQECDLLRSQLDSYGQVLTYDPQVTDPLKIYL
CCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEE
KSDRMTGEELAEFLYEYGIDGEFAGEEGLLLIFSFHHNPQDFQFMRETLAKVVAILREKP
ECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
IKQIVPDSYFSRRPQINTLPKDAFFCRKEKLPIGEVLGKISSCWIKKVPPGSPILIPGEE
HHHHCCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCEEECCCH
VTNWHIERLSPDTVVEVVGA
HCCEEHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377; 1697575; 1936936 [H]