| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475092
Identifier: 113475092
GI number: 113475092
Start: 2098603
End: 2099235
Strand: Reverse
Name: 113475092
Synonym: Tery_1368
Alternate gene names: NA
Gene position: 2099235-2098603 (Counterclockwise)
Preceding gene: 113475093
Following gene: 113475091
Centisome position: 27.09
GC content: 37.28
Gene sequence:
>633_bases ATGGTCGAAGAACAATCCAAAGATTTCTTAGAAGCAAGACCTTGGTTATCAGGGATTTGTGATACTCAAAGCACTGAGGA ATTAAAAAATAAGTATGATGGTTGGGCTAAGACTTATGATACAGATGTCAGAAAAGATTGGTTTTTTATGCCTGGTAATA TAGCAATAACATTAAGCCAACTGCTTCCTCACAAAGAAACCGCAATTCTGGATGCTGGTGCTGGAACGGGTTTAGTGGGT GAAGCTTTAGCCCAACAAGGATATACAAATATTACTGCTGTTGATTTGTCAGAAAAAATGCTGGCGATCGCTAAAGAGAG AGAAGTTTACAAGGCTCTCCATCACTGTAATTTAGAAGATTCCCAAATTTTTAACAATTCAGTAACTTTTGATGCTATTA TTGCAGCAGGAGTTTTTGCTTATGCCCATGCTGGTGTTAAGGTATTAAACAATCTATTCGGTCTTTTAAGAGAGGACGGA ATTTTTTTGTTGACGATACGGGAAGACTATCGCCGTGAAATGCAGATAGCATTAGATAAATTACCGTGGACATTAGTCAG TGAAGAAAATTTTACGATCTATGACGAAGCCAAGTTGATGTATCTTCTTGGTTTTAAAAGGGAGGGATATTAA
Upstream 100 bases:
>100_bases AGGGAGTCCGATTTTGATACCAGGAGAAGAAGTAACTAATTGGCACATAGAACGTTTATCTCCTGATACTGTTGTTGAAG TAGTAGGTGCGTAATTAAAA
Downstream 100 bases:
>100_bases TGAATACTAAAATTGACCAATCCACTCGATCTGAGCAAGAAACCTTGGATAATAAAAGGTTCGTTAAAATCTCCGATCGA GAAGATAGATGTGATATTCC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Domain Family; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MVEEQSKDFLEARPWLSGICDTQSTEELKNKYDGWAKTYDTDVRKDWFFMPGNIAITLSQLLPHKETAILDAGAGTGLVG EALAQQGYTNITAVDLSEKMLAIAKEREVYKALHHCNLEDSQIFNNSVTFDAIIAAGVFAYAHAGVKVLNNLFGLLREDG IFLLTIREDYRREMQIALDKLPWTLVSEENFTIYDEAKLMYLLGFKREGY
Sequences:
>Translated_210_residues MVEEQSKDFLEARPWLSGICDTQSTEELKNKYDGWAKTYDTDVRKDWFFMPGNIAITLSQLLPHKETAILDAGAGTGLVG EALAQQGYTNITAVDLSEKMLAIAKEREVYKALHHCNLEDSQIFNNSVTFDAIIAAGVFAYAHAGVKVLNNLFGLLREDG IFLLTIREDYRREMQIALDKLPWTLVSEENFTIYDEAKLMYLLGFKREGY >Mature_210_residues MVEEQSKDFLEARPWLSGICDTQSTEELKNKYDGWAKTYDTDVRKDWFFMPGNIAITLSQLLPHKETAILDAGAGTGLVG EALAQQGYTNITAVDLSEKMLAIAKEREVYKALHHCNLEDSQIFNNSVTFDAIIAAGVFAYAHAGVKVLNNLFGLLREDG IFLLTIREDYRREMQIALDKLPWTLVSEENFTIYDEAKLMYLLGFKREGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI30795190, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23800; Mature: 23800
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEEQSKDFLEARPWLSGICDTQSTEELKNKYDGWAKTYDTDVRKDWFFMPGNIAITLSQ CCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEECCCCEEEHHH LLPHKETAILDAGAGTGLVGEALAQQGYTNITAVDLSEKMLAIAKEREVYKALHHCNLED HCCCCHHEEEECCCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCH SQIFNNSVTFDAIIAAGVFAYAHAGVKVLNNLFGLLREDGIFLLTIREDYRREMQIALDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH LPWTLVSEENFTIYDEAKLMYLLGFKREGY CCEEEECCCCEEEEECCEEEEEEECCCCCC >Mature Secondary Structure MVEEQSKDFLEARPWLSGICDTQSTEELKNKYDGWAKTYDTDVRKDWFFMPGNIAITLSQ CCCCCHHHHHHHCHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEECCCCEEEHHH LLPHKETAILDAGAGTGLVGEALAQQGYTNITAVDLSEKMLAIAKEREVYKALHHCNLED HCCCCHHEEEECCCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCH SQIFNNSVTFDAIIAAGVFAYAHAGVKVLNNLFGLLREDGIFLLTIREDYRREMQIALDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH LPWTLVSEENFTIYDEAKLMYLLGFKREGY CCEEEECCCCEEEEECCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA