Click here to switch to the map view.

The map label for this gene is frpC [H]

Identifier: 113475080

GI number: 113475080

Start: 2073515

End: 2075386

Strand: Reverse

Name: frpC [H]

Synonym: Tery_1355

Alternate gene names: 113475080

Gene position: 2075386-2073515 (Counterclockwise)

Preceding gene: 113475081

Following gene: 113475078

Centisome position: 26.78

GC content: 41.4

Gene sequence:

>1872_bases
ATGGTGACATTAAGTGACGCAGACAATAACTTTGATCAGGACCAATCAGACCAGATGAAACCTGATACCATTAATGCTAT
TGGTGGAGATGACATAATATTAAGTTCTACCCTGGGAGGTAGTCTAATTAGAGGTGGAAATGGAAACGATACTTTGCTGT
CCAGAGGGCCTGCTGGAATTGGCAACTCTGGTGAAGGTGACACTCTTGAAGGGGGGAATGGAGATGATACCTTAGACTTC
AGAGCAGCAGGAGGCACTGGATTTGGAGATGAGGGCAATGATACCTTAAAAGCTATTACCCAAACTACCCTGTATGGAGG
TAATGGGGAGGACTCTCTCATAAGTTTGATTGAAGGAAACTATCTATCAGGCAATCGAGATAATGATAGATTCTTCATAA
CAGAGAGAGATACTGTTTATGGAGGTAAAGGTAATGATACTATTCTTAATAGGGATACCTCAACTCCATCAGAAAATTCT
GGGTTTAATTTTATATCTGCAAACAATAACGAAGATTATGTCAAGGTGTCTGGTGATCGCGATACTATCTATGGTGGTAA
GGAGGACGATACACTAATTTCTTCGGGTAGTCGAGTCTTTATAAGTGGAGATAAAGGTAATGACACAATCACTAACTCGG
AAGAAAGGTCTACCCTACTTGGTGGTGAAGGTGATGATTCGATTATGGGCGGGCTTGATCCATCTCCTAGTGATGAGAAT
AATAATAGTAGAAATAGTCTAGAGGGTGGTGCGGGTAGCGATACTCTCATTGGTCGAGGTGCGAGGGACACTTTGATTGG
TGGTGAAGGTAATGACTCTATTGTAAGCAAGTCTACTGATGAAGGTTCTGATGGTCAAAACAGATTGGATGGTGGTGCAG
GTAGCGATACCTTAGTAGGGGGATATGTAACTGATACAATGATCGGGGGTGATGGTAATGACTCCCTTAGTGGTATATTC
ACAAAGGGAGATGGTGGTGGAGGTAATGACACCATAAATGCTACTGCTGCAGGTACTGATGCTGCTCAAATTACCCTTAT
TGGTGGTGCAGGTAATGACAGTTTACTAGGTAATACTAGTGCTGGTGTATCTAACTTCTTCGATGGTGGTACAGGCAATG
ACTTTATCCAGTTTGGATCAACTAACGATCAGTTAATTGGGAACAACAGAGGTAACGATACTATTGCTGCGGTTGGAACT
AGTACATCAGGATTTAATATTCAAGATACCTTCGGCAATAATACTATTACTGGTGGTAAAGGAAATGACACACTAGTTAC
TGGAGGAGGTAATGACTCTATTACTGGTGGTAACTCAGTCAGTGAAGATTCCCCAGACGAAGGAGATGATCGTATTGTTG
CTGGTGCAGGGAATGACACAATATTCGGACGTGGTGGCAAAGATACAATTATTGGTGGTGATGGTGATGACTATATTGTA
GGAGGTCTTGACAGTACAGGCGATTCATTAATTGGTGGTGCAGGAAACGATAGTTTCGTTTATTTTGGTTTGGATGGTAA
GGACCAAAGTCCAAATAGTGTTATTGTAGATTTCGATACTGCTGACGACAAAATACTGCTTCGAGATCAAGGATTTAATT
TAGCCAACTCTGAGGCAGGTTCAACAATTGCTAATGCTGATTTGGTTCTTATTGACCCAGGCAATAACTATAGCAACGAT
GATGCTCGAAGTACTAATCCTACAATTATCTACGAGCCTGAGCCTCTAAACGGAAATGAAAGAATAGATTCTGGTTTATT
AAAGTACGATCCTAGTGGTAGTGGTGGTCCAGATGATAACAGCGATGTTGTTACTATTGCTCGTCTCAACGGTAATCCAG
GTCTTGAGAACAGCGATATTTTAATTATCTAA

Upstream 100 bases:

>100_bases
AACTACAGCCGAATATAAAATAACTTCTGTTTTTAGTGGTATAACTAAACAGAATAATTGACCATAAATATTATAGATAA
ATGTAGAGGAGTGAAACGGT

Downstream 100 bases:

>100_bases
TTCTGAGCAATTAGAAAAAATCCTCAAAAAAGTTGGGTCTAAAACCAACTCCTTCTAGGGTATTGTTGTTTTCTTTCCAG
GGAAATAGCTGTTTGAGTGG

Product: hemolysin-type calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MVTLSDADNNFDQDQSDQMKPDTINAIGGDDIILSSTLGGSLIRGGNGNDTLLSRGPAGIGNSGEGDTLEGGNGDDTLDF
RAAGGTGFGDEGNDTLKAITQTTLYGGNGEDSLISLIEGNYLSGNRDNDRFFITERDTVYGGKGNDTILNRDTSTPSENS
GFNFISANNNEDYVKVSGDRDTIYGGKEDDTLISSGSRVFISGDKGNDTITNSEERSTLLGGEGDDSIMGGLDPSPSDEN
NNSRNSLEGGAGSDTLIGRGARDTLIGGEGNDSIVSKSTDEGSDGQNRLDGGAGSDTLVGGYVTDTMIGGDGNDSLSGIF
TKGDGGGGNDTINATAAGTDAAQITLIGGAGNDSLLGNTSAGVSNFFDGGTGNDFIQFGSTNDQLIGNNRGNDTIAAVGT
STSGFNIQDTFGNNTITGGKGNDTLVTGGGNDSITGGNSVSEDSPDEGDDRIVAGAGNDTIFGRGGKDTIIGGDGDDYIV
GGLDSTGDSLIGGAGNDSFVYFGLDGKDQSPNSVIVDFDTADDKILLRDQGFNLANSEAGSTIANADLVLIDPGNNYSND
DARSTNPTIIYEPEPLNGNERIDSGLLKYDPSGSGGPDDNSDVVTIARLNGNPGLENSDILII

Sequences:

>Translated_623_residues
MVTLSDADNNFDQDQSDQMKPDTINAIGGDDIILSSTLGGSLIRGGNGNDTLLSRGPAGIGNSGEGDTLEGGNGDDTLDF
RAAGGTGFGDEGNDTLKAITQTTLYGGNGEDSLISLIEGNYLSGNRDNDRFFITERDTVYGGKGNDTILNRDTSTPSENS
GFNFISANNNEDYVKVSGDRDTIYGGKEDDTLISSGSRVFISGDKGNDTITNSEERSTLLGGEGDDSIMGGLDPSPSDEN
NNSRNSLEGGAGSDTLIGRGARDTLIGGEGNDSIVSKSTDEGSDGQNRLDGGAGSDTLVGGYVTDTMIGGDGNDSLSGIF
TKGDGGGGNDTINATAAGTDAAQITLIGGAGNDSLLGNTSAGVSNFFDGGTGNDFIQFGSTNDQLIGNNRGNDTIAAVGT
STSGFNIQDTFGNNTITGGKGNDTLVTGGGNDSITGGNSVSEDSPDEGDDRIVAGAGNDTIFGRGGKDTIIGGDGDDYIV
GGLDSTGDSLIGGAGNDSFVYFGLDGKDQSPNSVIVDFDTADDKILLRDQGFNLANSEAGSTIANADLVLIDPGNNYSND
DARSTNPTIIYEPEPLNGNERIDSGLLKYDPSGSGGPDDNSDVVTIARLNGNPGLENSDILII
>Mature_623_residues
MVTLSDADNNFDQDQSDQMKPDTINAIGGDDIILSSTLGGSLIRGGNGNDTLLSRGPAGIGNSGEGDTLEGGNGDDTLDF
RAAGGTGFGDEGNDTLKAITQTTLYGGNGEDSLISLIEGNYLSGNRDNDRFFITERDTVYGGKGNDTILNRDTSTPSENS
GFNFISANNNEDYVKVSGDRDTIYGGKEDDTLISSGSRVFISGDKGNDTITNSEERSTLLGGEGDDSIMGGLDPSPSDEN
NNSRNSLEGGAGSDTLIGRGARDTLIGGEGNDSIVSKSTDEGSDGQNRLDGGAGSDTLVGGYVTDTMIGGDGNDSLSGIF
TKGDGGGGNDTINATAAGTDAAQITLIGGAGNDSLLGNTSAGVSNFFDGGTGNDFIQFGSTNDQLIGNNRGNDTIAAVGT
STSGFNIQDTFGNNTITGGKGNDTLVTGGGNDSITGGNSVSEDSPDEGDDRIVAGAGNDTIFGRGGKDTIIGGDGDDYIV
GGLDSTGDSLIGGAGNDSFVYFGLDGKDQSPNSVIVDFDTADDKILLRDQGFNLANSEAGSTIANADLVLIDPGNNYSND
DARSTNPTIIYEPEPLNGNERIDSGLLKYDPSGSGGPDDNSDVVTIARLNGNPGLENSDILII

Specific function: May participate in the pathogenesis of meningococcal disease [H]

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein. Secreted (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 22 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010566
- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR003995
- InterPro:   IPR011049 [H]

Pfam domain/function: PF06594 HCBP_related; PF00353 HemolysinCabind [H]

EC number: NA

Molecular weight: Translated: 63404; Mature: 63404

Theoretical pI: Translated: 3.63; Mature: 3.63

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLSDADNNFDQDQSDQMKPDTINAIGGDDIILSSTLGGSLIRGGNGNDTLLSRGPAGI
CEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCCCCC
GNSGEGDTLEGGNGDDTLDFRAAGGTGFGDEGNDTLKAITQTTLYGGNGEDSLISLIEGN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEECCC
YLSGNRDNDRFFITERDTVYGGKGNDTILNRDTSTPSENSGFNFISANNNEDYVKVSGDR
EECCCCCCCEEEEEECCEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCC
DTIYGGKEDDTLISSGSRVFISGDKGNDTITNSEERSTLLGGEGDDSIMGGLDPSPSDEN
CEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCHHHEEECCCCCCCEECCCCCCCCCCC
NNSRNSLEGGAGSDTLIGRGARDTLIGGEGNDSIVSKSTDEGSDGQNRLDGGAGSDTLVG
CCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCEEECCCCCCCCCCHHCCCCCCCCCEEE
GYVTDTMIGGDGNDSLSGIFTKGDGGGGNDTINATAAGTDAAQITLIGGAGNDSLLGNTS
CEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC
AGVSNFFDGGTGNDFIQFGSTNDQLIGNNRGNDTIAAVGTSTSGFNIQDTFGNNTITGGK
CCHHHHCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCEEEECCCCCEEECCC
GNDTLVTGGGNDSITGGNSVSEDSPDEGDDRIVAGAGNDTIFGRGGKDTIIGGDGDDYIV
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCEEE
GGLDSTGDSLIGGAGNDSFVYFGLDGKDQSPNSVIVDFDTADDKILLRDQGFNLANSEAG
ECCCCCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
STIANADLVLIDPGNNYSNDDARSTNPTIIYEPEPLNGNERIDSGLLKYDPSGSGGPDDN
CEEECCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEECCCCCCCCCCC
SDVVTIARLNGNPGLENSDILII
CCEEEEEEECCCCCCCCCCEEEC
>Mature Secondary Structure
MVTLSDADNNFDQDQSDQMKPDTINAIGGDDIILSSTLGGSLIRGGNGNDTLLSRGPAGI
CEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCCCCC
GNSGEGDTLEGGNGDDTLDFRAAGGTGFGDEGNDTLKAITQTTLYGGNGEDSLISLIEGN
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEECCC
YLSGNRDNDRFFITERDTVYGGKGNDTILNRDTSTPSENSGFNFISANNNEDYVKVSGDR
EECCCCCCCEEEEEECCEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCC
DTIYGGKEDDTLISSGSRVFISGDKGNDTITNSEERSTLLGGEGDDSIMGGLDPSPSDEN
CEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCHHHEEECCCCCCCEECCCCCCCCCCC
NNSRNSLEGGAGSDTLIGRGARDTLIGGEGNDSIVSKSTDEGSDGQNRLDGGAGSDTLVG
CCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCEEECCCCCCCCCCHHCCCCCCCCCEEE
GYVTDTMIGGDGNDSLSGIFTKGDGGGGNDTINATAAGTDAAQITLIGGAGNDSLLGNTS
CEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC
AGVSNFFDGGTGNDFIQFGSTNDQLIGNNRGNDTIAAVGTSTSGFNIQDTFGNNTITGGK
CCHHHHCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCEEEECCCCCEEECCC
GNDTLVTGGGNDSITGGNSVSEDSPDEGDDRIVAGAGNDTIFGRGGKDTIIGGDGDDYIV
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCEEE
GGLDSTGDSLIGGAGNDSFVYFGLDGKDQSPNSVIVDFDTADDKILLRDQGFNLANSEAG
ECCCCCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCC
STIANADLVLIDPGNNYSNDDARSTNPTIIYEPEPLNGNERIDSGLLKYDPSGSGGPDDN
CEEECCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEECCCCCCCCCCC
SDVVTIARLNGNPGLENSDILII
CCEEEEEEECCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]