| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475068
Identifier: 113475068
GI number: 113475068
Start: 2042045
End: 2043895
Strand: Reverse
Name: 113475068
Synonym: Tery_1341
Alternate gene names: NA
Gene position: 2043895-2042045 (Counterclockwise)
Preceding gene: 113475069
Following gene: 113475067
Centisome position: 26.37
GC content: 32.09
Gene sequence:
>1851_bases ATGTTAGCAAAAAAAAAATCAGAAGTTAATTTTATAATCCTCACAATTATCACAATTCTACTACCTGCTTTTTATGTACT TTTTATGATATCAAAGGCGGGAGAATTACTAAATTTCGATTATTGGTGGATGATTAAAAATATCTATTCTATAGATGGTT TCTCCACTAATATTTTTGACTGGATCTTTCGGGCAAATGAACATTTTGTCTTAATTCCTGCCATAATTTATGCCCTGAAT ATTGTTATTACTAAAGGTTCCAATATTGGGTTATGTCTAACTACATTTTTCCTAGCTTGTGTTCAGGGAATTTTATTAAA AATCTTAGTACCTAATACTCTCAAAAAACATCGTCCGATACTTTTCTTACTAATTTTATTTATCTCAGTTTTTAACTTTA CCCCTGCTGCTGCTCATAACTGGATGCGCGGATATAGTGGAGTACATTGGGTAATTGCTAATTTATTTGTCATTGCCTCA ATTTTTTGCGTCAAAAAATTACTAGAATCTCAACAAAATAGATTTGCTATTACTAGTATAACCTTGGGAATTTTAGGATG TATTAGTTATAGTACCGCTCTAGGAATTTGGCCTATATTATGTGGAGTTGCCATTCTATATAAATTGCCAAAAAAGTTGA CTTTCTCTTATCTATTTTTTTCTGTTTTAGTAATAGGTATTTATTTTATCACCTACACAACACCCTCTCATCATCCCTCA TTATCTAAACTGAATTTTCTTGATATAGTTACTTACATTCCTATTTATTTAGGAGCAATTTTTACTCATAATATTTCCCT GGCTTTGGCAATAGGTTGGGTAGGATTAGTTTTAGCAGGAATATTTTTAATTTATTGGTTATTTATAATTTATCCTCAAG ATTGGTTGCCCTGGTTATCAATAATAATTTATACTTTGGGTACTGCTTTGATGGCTGCTGTTAGTCGTTCTGGGTTTGGA ATAGAACAAGCGATCGCTTCTCGTTACGGAACCCTACCTGCTCTATTCTGGTTAAGTCTAATTATTCTGATTTTTTTATG GTTAAAACAACAACAATTTACCCCAAGAAGACAATGGTATTTTGTTGCTCCATTAGTGGCACTTTTGACTATTTTGATTA TATTAATGTATCGAGTAGGTACAGAAACTTTTAAAGAAATTGCTCATCGGGCAACTTTTCAACCTTTAGTAGCATTATCC TTACAAATAGGAGTTTTAGATCCGACTTTAATTCAAGAGAAAGTTGGTAACCGACCTGCTGCTTTTTTAGGGTTAGTAGA TGCTTTGAAATCTGATAGTTTAGTACCTTTTAATCGAGATATAAAAAAGGATAATTTTTGTGCTAATTTGGATGAGAAAA TTAATTCTAATTTATTAACTGGAAAACTGCCAGAAAATTGGCAGGGATATTTTGATAATGTGACTAAATTTTCTCCAACT ACAGCAAGAGTAAATGGATGGGTTAGTAAAGTTAAAAGTAAACTCCCCTCTTACTCTTCCCAAGCTAGGAAGTCAGACCC ACTATTACCTCCTTCAAACTGGGAAGTAAAAAGTCAAGAGAATGTTCAGATTAAATGTATTGCTATTTTGAATCAAGAAA ATGTAGTAAAAGGTTTTGGAATGTCTGGTTTTCCTCGTGCTGATGTAGCAAATTTATTAGGAGCAGAATATGAATTTTCA GGTTGGAAAGGATATATTGAGGTCAAAAGTGAAAAGTCAAAACTCGAAAGTCAAGAGAATGTTCAAATCTCAGCCAAGGA AATTCTAACAGCTTATGTTAAGTTGAAAAATCGTCAAGATTGGATAGCTTTAACAAATAAACATAGTTTTGATGGTGGTA GTGCATTATAA
Upstream 100 bases:
>100_bases CTATTCTTTTTTCAAACATTCTAAGTAGCATAACAAAGATTAACCTGTTTCAAATTAATCTGTAAATCTGTGGCAAAATT CCTGTCTTGTATTCCTATTT
Downstream 100 bases:
>100_bases TGGTAGTCTATTGTAATTATTTTGGTTAGCTACAACAATACTGGGAGTATCTGGCTCCCTTGTCTAATGTTGTTAATCCT GATTTTCAATTACTAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MLAKKKSEVNFIILTIITILLPAFYVLFMISKAGELLNFDYWWMIKNIYSIDGFSTNIFDWIFRANEHFVLIPAIIYALN IVITKGSNIGLCLTTFFLACVQGILLKILVPNTLKKHRPILFLLILFISVFNFTPAAAHNWMRGYSGVHWVIANLFVIAS IFCVKKLLESQQNRFAITSITLGILGCISYSTALGIWPILCGVAILYKLPKKLTFSYLFFSVLVIGIYFITYTTPSHHPS LSKLNFLDIVTYIPIYLGAIFTHNISLALAIGWVGLVLAGIFLIYWLFIIYPQDWLPWLSIIIYTLGTALMAAVSRSGFG IEQAIASRYGTLPALFWLSLIILIFLWLKQQQFTPRRQWYFVAPLVALLTILIILMYRVGTETFKEIAHRATFQPLVALS LQIGVLDPTLIQEKVGNRPAAFLGLVDALKSDSLVPFNRDIKKDNFCANLDEKINSNLLTGKLPENWQGYFDNVTKFSPT TARVNGWVSKVKSKLPSYSSQARKSDPLLPPSNWEVKSQENVQIKCIAILNQENVVKGFGMSGFPRADVANLLGAEYEFS GWKGYIEVKSEKSKLESQENVQISAKEILTAYVKLKNRQDWIALTNKHSFDGGSAL
Sequences:
>Translated_616_residues MLAKKKSEVNFIILTIITILLPAFYVLFMISKAGELLNFDYWWMIKNIYSIDGFSTNIFDWIFRANEHFVLIPAIIYALN IVITKGSNIGLCLTTFFLACVQGILLKILVPNTLKKHRPILFLLILFISVFNFTPAAAHNWMRGYSGVHWVIANLFVIAS IFCVKKLLESQQNRFAITSITLGILGCISYSTALGIWPILCGVAILYKLPKKLTFSYLFFSVLVIGIYFITYTTPSHHPS LSKLNFLDIVTYIPIYLGAIFTHNISLALAIGWVGLVLAGIFLIYWLFIIYPQDWLPWLSIIIYTLGTALMAAVSRSGFG IEQAIASRYGTLPALFWLSLIILIFLWLKQQQFTPRRQWYFVAPLVALLTILIILMYRVGTETFKEIAHRATFQPLVALS LQIGVLDPTLIQEKVGNRPAAFLGLVDALKSDSLVPFNRDIKKDNFCANLDEKINSNLLTGKLPENWQGYFDNVTKFSPT TARVNGWVSKVKSKLPSYSSQARKSDPLLPPSNWEVKSQENVQIKCIAILNQENVVKGFGMSGFPRADVANLLGAEYEFS GWKGYIEVKSEKSKLESQENVQISAKEILTAYVKLKNRQDWIALTNKHSFDGGSAL >Mature_616_residues MLAKKKSEVNFIILTIITILLPAFYVLFMISKAGELLNFDYWWMIKNIYSIDGFSTNIFDWIFRANEHFVLIPAIIYALN IVITKGSNIGLCLTTFFLACVQGILLKILVPNTLKKHRPILFLLILFISVFNFTPAAAHNWMRGYSGVHWVIANLFVIAS IFCVKKLLESQQNRFAITSITLGILGCISYSTALGIWPILCGVAILYKLPKKLTFSYLFFSVLVIGIYFITYTTPSHHPS LSKLNFLDIVTYIPIYLGAIFTHNISLALAIGWVGLVLAGIFLIYWLFIIYPQDWLPWLSIIIYTLGTALMAAVSRSGFG IEQAIASRYGTLPALFWLSLIILIFLWLKQQQFTPRRQWYFVAPLVALLTILIILMYRVGTETFKEIAHRATFQPLVALS LQIGVLDPTLIQEKVGNRPAAFLGLVDALKSDSLVPFNRDIKKDNFCANLDEKINSNLLTGKLPENWQGYFDNVTKFSPT TARVNGWVSKVKSKLPSYSSQARKSDPLLPPSNWEVKSQENVQIKCIAILNQENVVKGFGMSGFPRADVANLLGAEYEFS GWKGYIEVKSEKSKLESQENVQISAKEILTAYVKLKNRQDWIALTNKHSFDGGSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69511; Mature: 69511
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKKKSEVNFIILTIITILLPAFYVLFMISKAGELLNFDYWWMIKNIYSIDGFSTNIFD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHH WIFRANEHFVLIPAIIYALNIVITKGSNIGLCLTTFFLACVQGILLKILVPNTLKKHRPI HHHHCCCCEEEHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHH LFLLILFISVFNFTPAAAHNWMRGYSGVHWVIANLFVIASIFCVKKLLESQQNRFAITSI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHH TLGILGCISYSTALGIWPILCGVAILYKLPKKLTFSYLFFSVLVIGIYFITYTTPSHHPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LSKLNFLDIVTYIPIYLGAIFTHNISLALAIGWVGLVLAGIFLIYWLFIIYPQDWLPWLS CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIIYTLGTALMAAVSRSGFGIEQAIASRYGTLPALFWLSLIILIFLWLKQQQFTPRRQWY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE FVAPLVALLTILIILMYRVGTETFKEIAHRATFQPLVALSLQIGVLDPTLIQEKVGNRPA EHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCH AFLGLVDALKSDSLVPFNRDIKKDNFCANLDEKINSNLLTGKLPENWQGYFDNVTKFSPT HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCHHHHHCCCCCCCCC TARVNGWVSKVKSKLPSYSSQARKSDPLLPPSNWEVKSQENVQIKCIAILNQENVVKGFG HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCC MSGFPRADVANLLGAEYEFSGWKGYIEVKSEKSKLESQENVQISAKEILTAYVKLKNRQD CCCCCHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCCEEHHHHHHHHHHHHCCCCC WIALTNKHSFDGGSAL EEEEECCCCCCCCCCC >Mature Secondary Structure MLAKKKSEVNFIILTIITILLPAFYVLFMISKAGELLNFDYWWMIKNIYSIDGFSTNIFD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHH WIFRANEHFVLIPAIIYALNIVITKGSNIGLCLTTFFLACVQGILLKILVPNTLKKHRPI HHHHCCCCEEEHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHH LFLLILFISVFNFTPAAAHNWMRGYSGVHWVIANLFVIASIFCVKKLLESQQNRFAITSI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHH TLGILGCISYSTALGIWPILCGVAILYKLPKKLTFSYLFFSVLVIGIYFITYTTPSHHPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LSKLNFLDIVTYIPIYLGAIFTHNISLALAIGWVGLVLAGIFLIYWLFIIYPQDWLPWLS CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIIYTLGTALMAAVSRSGFGIEQAIASRYGTLPALFWLSLIILIFLWLKQQQFTPRRQWY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE FVAPLVALLTILIILMYRVGTETFKEIAHRATFQPLVALSLQIGVLDPTLIQEKVGNRPA EHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCH AFLGLVDALKSDSLVPFNRDIKKDNFCANLDEKINSNLLTGKLPENWQGYFDNVTKFSPT HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCHHHHHCCCCCCCCC TARVNGWVSKVKSKLPSYSSQARKSDPLLPPSNWEVKSQENVQIKCIAILNQENVVKGFG HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCC MSGFPRADVANLLGAEYEFSGWKGYIEVKSEKSKLESQENVQISAKEILTAYVKLKNRQD CCCCCHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCCCCCEEHHHHHHHHHHHHCCCCC WIALTNKHSFDGGSAL EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA