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The map label for this gene is arnC [H]

Identifier: 113475067

GI number: 113475067

Start: 2040749

End: 2041705

Strand: Reverse

Name: arnC [H]

Synonym: Tery_1340

Alternate gene names: 113475067

Gene position: 2041705-2040749 (Counterclockwise)

Preceding gene: 113475068

Following gene: 113475065

Centisome position: 26.34

GC content: 29.78

Gene sequence:

>957_bases
ATGGAGATATTTAATATATACCTCAGTTTTGTAATTCCTGTTTATAATGAAGAAGTTACAATCAAACCCTTGTTTGAGAG
AATTTTGGATGTAATGAATTTAGGAAAAATTGATAATTATGAAATCATTTTTGTGGATGATGGTAGTAGCGATCGCTCTT
GGATAGAGATTAATAAATTAATCAAAAAACACCCCCGTCAAGTCAAAGGAATTAGATTAAGAAGAAACTTTGGTAAATCT
TCTGCTTTATCTGCTGGATTTAAAAAAACTAGAGGAAATATTATCTTTACTTTAGACGCAGACTTACAAGATGATCCTGC
GGAAATACCTAAATTTTTGGAAAAGTTAGAGTCAGGATATGATTTAGTTTCTGGATGGCGAAAACATCGTAATGACCCTC
TTTCTAAAACATTACCCTCGAAATTATTTAATGGAGTTACATCGGTTTTAACTGGAGTCAAATTACATGATTTTAATTGT
GGCTTAAAAGCTTATAAAAAAGAGGTATTAGATTGTATAAAGGTCTATGGAGAATTACATCGTTATATTCCGGTATTAGC
TCATAGTTTAGGATTTAAAATTACTGAAGTAGTTGTAGAACATCATAGTCGTACAAAGGGTAAATCCAAGTATGGTTTAG
AACGTTATACTCGTGGATTTATTGATCTATTAACAGTTTTAGTAACTACTTATTATTTACATAAACCAGGTCATTTGTTT
GGTAGTTTAGGATTATTATTTGGTGTTATAGGAATGACATCTTTGGGATATTTAATTGTACTTTGGTTTATGGAGATTCG
ACCGATAGGTAATCGCCCTTTATTTTTATTTGGAATTTTGTGTATTATTCTTTCTGTACAGTTAATATCTTTAGGAATTT
TGGCAGAATTAATTACTAAAAATGTAGATGATAATTATGTGGATAAACAAATTTGTGAATTTATTGAAGAAGAGTAG

Upstream 100 bases:

>100_bases
AATAGACTTTTACGAAAATCAAAAATAAAATTAACTATGAACCAGAAATTATTAATTAATTCTCTGTATTTCCTATTACC
AATTCCCTCTTATTTATTTT

Downstream 100 bases:

>100_bases
GTTTGAGGTGGTAGATTTTTATGATACTACCAAGTATATTAGGTTCAGTAAATAAACCTAATACTAATGTTAATATGTTT
TTGTTATACTTTGTTGAGTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MEIFNIYLSFVIPVYNEEVTIKPLFERILDVMNLGKIDNYEIIFVDDGSSDRSWIEINKLIKKHPRQVKGIRLRRNFGKS
SALSAGFKKTRGNIIFTLDADLQDDPAEIPKFLEKLESGYDLVSGWRKHRNDPLSKTLPSKLFNGVTSVLTGVKLHDFNC
GLKAYKKEVLDCIKVYGELHRYIPVLAHSLGFKITEVVVEHHSRTKGKSKYGLERYTRGFIDLLTVLVTTYYLHKPGHLF
GSLGLLFGVIGMTSLGYLIVLWFMEIRPIGNRPLFLFGILCIILSVQLISLGILAELITKNVDDNYVDKQICEFIEEE

Sequences:

>Translated_318_residues
MEIFNIYLSFVIPVYNEEVTIKPLFERILDVMNLGKIDNYEIIFVDDGSSDRSWIEINKLIKKHPRQVKGIRLRRNFGKS
SALSAGFKKTRGNIIFTLDADLQDDPAEIPKFLEKLESGYDLVSGWRKHRNDPLSKTLPSKLFNGVTSVLTGVKLHDFNC
GLKAYKKEVLDCIKVYGELHRYIPVLAHSLGFKITEVVVEHHSRTKGKSKYGLERYTRGFIDLLTVLVTTYYLHKPGHLF
GSLGLLFGVIGMTSLGYLIVLWFMEIRPIGNRPLFLFGILCIILSVQLISLGILAELITKNVDDNYVDKQICEFIEEE
>Mature_318_residues
MEIFNIYLSFVIPVYNEEVTIKPLFERILDVMNLGKIDNYEIIFVDDGSSDRSWIEINKLIKKHPRQVKGIRLRRNFGKS
SALSAGFKKTRGNIIFTLDADLQDDPAEIPKFLEKLESGYDLVSGWRKHRNDPLSKTLPSKLFNGVTSVLTGVKLHDFNC
GLKAYKKEVLDCIKVYGELHRYIPVLAHSLGFKITEVVVEHHSRTKGKSKYGLERYTRGFIDLLTVLVTTYYLHKPGHLF
GSLGLLFGVIGMTSLGYLIVLWFMEIRPIGNRPLFLFGILCIILSVQLISLGILAELITKNVDDNYVDKQICEFIEEE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=30.3418803418803, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1788588, Length=300, Percent_Identity=34.6666666666667, Blast_Score=171, Evalue=9e-44,
Organism=Escherichia coli, GI1788692, Length=295, Percent_Identity=26.4406779661017, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6325441, Length=112, Percent_Identity=36.6071428571429, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585265, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36332; Mature: 36332

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFNIYLSFVIPVYNEEVTIKPLFERILDVMNLGKIDNYEIIFVDDGSSDRSWIEINKL
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
IKKHPRQVKGIRLRRNFGKSSALSAGFKKTRGNIIFTLDADLQDDPAEIPKFLEKLESGY
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCH
DLVSGWRKHRNDPLSKTLPSKLFNGVTSVLTGVKLHDFNCGLKAYKKEVLDCIKVYGELH
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RYIPVLAHSLGFKITEVVVEHHSRTKGKSKYGLERYTRGFIDLLTVLVTTYYLHKPGHLF
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GSLGLLFGVIGMTSLGYLIVLWFMEIRPIGNRPLFLFGILCIILSVQLISLGILAELITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDDNYVDKQICEFIEEE
CCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEIFNIYLSFVIPVYNEEVTIKPLFERILDVMNLGKIDNYEIIFVDDGSSDRSWIEINKL
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
IKKHPRQVKGIRLRRNFGKSSALSAGFKKTRGNIIFTLDADLQDDPAEIPKFLEKLESGY
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCH
DLVSGWRKHRNDPLSKTLPSKLFNGVTSVLTGVKLHDFNCGLKAYKKEVLDCIKVYGELH
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RYIPVLAHSLGFKITEVVVEHHSRTKGKSKYGLERYTRGFIDLLTVLVTTYYLHKPGHLF
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GSLGLLFGVIGMTSLGYLIVLWFMEIRPIGNRPLFLFGILCIILSVQLISLGILAELITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDDNYVDKQICEFIEEE
CCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA