The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475037

Identifier: 113475037

GI number: 113475037

Start: 1975139

End: 1976026

Strand: Direct

Name: 113475037

Synonym: Tery_1294

Alternate gene names: NA

Gene position: 1975139-1976026 (Clockwise)

Preceding gene: 113475036

Following gene: 113475040

Centisome position: 25.49

GC content: 32.77

Gene sequence:

>888_bases
ATGGTGAATTTAACAGCAATCAAAAACCTAAAAAAAAGTTTCTCTTTTGTACCTTTAAGGCAACGTTTTAATCGAAGAAA
AAAAATATCTTTTGAAGAAAAACAAAGTCAGGCATTAAAAGATATCGGGGATAAATTAAAAATGTTTAGAAATAAACATT
CTATTTGTTTAAAAAGAGTGGCAGTAGTGACAATGATTAGAATTAATTTACTAGAAGCAATAGAAGAAGGTAATTTAAAA
GAACTGCCAGAGCCAGTTTATATTCAAGGTATGATTAAGCGATATGCAGATGCTATAGGATTAGATGGAGAGGAACTAGC
AAACTCATTTCCAACTGCAAAAGTTCAGGAAATTACGATAAAATCTCTGCCGAATTTATCAATGCTTCAGCTACGACCAT
ATCATCTTTACTTTTTATATGTATTACTTGTTATTTTAGCAGTTCGTTTGTTACCTTATGTTAATAACTCTTATTATATA
TGGATACGAGATGGTATTACTAAGTCTGAAAAACAACAATATGAACGAGAAAATGAGGTTAATGTTTTACCTCCAGTTTC
TCAGAAAAATAGGAAAACTGAGGGAAGATCTTCAGATCAAACAACACAAAAGTCAGATAAACAAAATGATGGACAACCTG
TAGTTCTCAGTGTAATTGCGAAAGAAGAATCTTGGGTATCAATAAAGATAGATGGAAAAGTAGCGTTTGAAGGGACTTTA
GCTCAAGGCACTCAGAAAACTTGGTCAGCCCAAAAGCAACTGGTTTTTTTCGCAGGCAATGCTGGAGGAATAATTATACC
TATTGATAATGGGCAAAATATGCAACTGGGAAAACCGGGTGAAGTCAAAGAAGTTGTTCTTACTTCTACTAACACCCAAA
TACAATAA

Upstream 100 bases:

>100_bases
CCTGAATCATAACTCCTAGTAATTTGTAGCCAACTTTTTTCCAAATGGGATAACTATCCAAACTAAACAAGTTATAGTTT
ATATAAATTAAGTTAAAGCA

Downstream 100 bases:

>100_bases
ATAGTATAGCTTTAAGCTATCAGCTTAAGTTAAAGCTATCTATTGGTTGTAAAAGATTTTAATTTCATTAATGTCTCAAT
ACTTTTTTGTAGTGCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MVNLTAIKNLKKSFSFVPLRQRFNRRKKISFEEKQSQALKDIGDKLKMFRNKHSICLKRVAVVTMIRINLLEAIEEGNLK
ELPEPVYIQGMIKRYADAIGLDGEELANSFPTAKVQEITIKSLPNLSMLQLRPYHLYFLYVLLVILAVRLLPYVNNSYYI
WIRDGITKSEKQQYERENEVNVLPPVSQKNRKTEGRSSDQTTQKSDKQNDGQPVVLSVIAKEESWVSIKIDGKVAFEGTL
AQGTQKTWSAQKQLVFFAGNAGGIIIPIDNGQNMQLGKPGEVKEVVLTSTNTQIQ

Sequences:

>Translated_295_residues
MVNLTAIKNLKKSFSFVPLRQRFNRRKKISFEEKQSQALKDIGDKLKMFRNKHSICLKRVAVVTMIRINLLEAIEEGNLK
ELPEPVYIQGMIKRYADAIGLDGEELANSFPTAKVQEITIKSLPNLSMLQLRPYHLYFLYVLLVILAVRLLPYVNNSYYI
WIRDGITKSEKQQYERENEVNVLPPVSQKNRKTEGRSSDQTTQKSDKQNDGQPVVLSVIAKEESWVSIKIDGKVAFEGTL
AQGTQKTWSAQKQLVFFAGNAGGIIIPIDNGQNMQLGKPGEVKEVVLTSTNTQIQ
>Mature_295_residues
MVNLTAIKNLKKSFSFVPLRQRFNRRKKISFEEKQSQALKDIGDKLKMFRNKHSICLKRVAVVTMIRINLLEAIEEGNLK
ELPEPVYIQGMIKRYADAIGLDGEELANSFPTAKVQEITIKSLPNLSMLQLRPYHLYFLYVLLVILAVRLLPYVNNSYYI
WIRDGITKSEKQQYERENEVNVLPPVSQKNRKTEGRSSDQTTQKSDKQNDGQPVVLSVIAKEESWVSIKIDGKVAFEGTL
AQGTQKTWSAQKQLVFFAGNAGGIIIPIDNGQNMQLGKPGEVKEVVLTSTNTQIQ

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33484; Mature: 33484

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLTAIKNLKKSFSFVPLRQRFNRRKKISFEEKQSQALKDIGDKLKMFRNKHSICLKRV
CCCHHHHHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVTMIRINLLEAIEEGNLKELPEPVYIQGMIKRYADAIGLDGEELANSFPTAKVQEITI
HHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEHH
KSLPNLSMLQLRPYHLYFLYVLLVILAVRLLPYVNNSYYIWIRDGITKSEKQQYERENEV
HCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCC
NVLPPVSQKNRKTEGRSSDQTTQKSDKQNDGQPVVLSVIAKEESWVSIKIDGKVAFEGTL
EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCEEEEECCC
AQGTQKTWSAQKQLVFFAGNAGGIIIPIDNGQNMQLGKPGEVKEVVLTSTNTQIQ
CCCCHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MVNLTAIKNLKKSFSFVPLRQRFNRRKKISFEEKQSQALKDIGDKLKMFRNKHSICLKRV
CCCHHHHHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVTMIRINLLEAIEEGNLKELPEPVYIQGMIKRYADAIGLDGEELANSFPTAKVQEITI
HHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEHH
KSLPNLSMLQLRPYHLYFLYVLLVILAVRLLPYVNNSYYIWIRDGITKSEKQQYERENEV
HCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCC
NVLPPVSQKNRKTEGRSSDQTTQKSDKQNDGQPVVLSVIAKEESWVSIKIDGKVAFEGTL
EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCEEEEECCC
AQGTQKTWSAQKQLVFFAGNAGGIIIPIDNGQNMQLGKPGEVKEVVLTSTNTQIQ
CCCCHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA