| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475029
Identifier: 113475029
GI number: 113475029
Start: 1966691
End: 1966912
Strand: Direct
Name: 113475029
Synonym: Tery_1286
Alternate gene names: NA
Gene position: 1966691-1966912 (Clockwise)
Preceding gene: 113475028
Following gene: 113475030
Centisome position: 25.38
GC content: 44.14
Gene sequence:
>222_bases ATGACGAGTATCCCAGCTAATGAGAGAATTGGCCCCACTCAACCAATAGAGCCAGGACAAGTCGAACGCAATGAGTTTGA GTACATTTCCCTAGGTACTCAATGTCTACTGGCCAACTGGCACATAGCCAAAAGACAAATCATTACCCCTTCAATTAAGG CCACCCCCAGAGAAGTTGATTTTCTGCAACACATTGAACAGACTATCCATACTGAATTCTGA
Upstream 100 bases:
>100_bases CCCAGTAGCTTTTCGCGACCAGGTTAAATCTATCTGTCAGTGATATCTGTCGGCCCAAGAATTACTCGAAAAAGGAATTC ATCTGATTAGTACCGATAAA
Downstream 100 bases:
>100_bases TGGAGGATGAATTTTTCGGATTAGAGCAACTCAATACTCATAAATCTGAATGATTAGTCCGTCAAGTGGCTCAATGTTGT GGTATTCAGACTGATTTGGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTSIPANERIGPTQPIEPGQVERNEFEYISLGTQCLLANWHIAKRQIITPSIKATPREVDFLQHIEQTIHTEF
Sequences:
>Translated_73_residues MTSIPANERIGPTQPIEPGQVERNEFEYISLGTQCLLANWHIAKRQIITPSIKATPREVDFLQHIEQTIHTEF >Mature_72_residues TSIPANERIGPTQPIEPGQVERNEFEYISLGTQCLLANWHIAKRQIITPSIKATPREVDFLQHIEQTIHTEF
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8385; Mature: 8253
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIPANERIGPTQPIEPGQVERNEFEYISLGTQCLLANWHIAKRQIITPSIKATPREVD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCEECCCCCCCCCCHHH FLQHIEQTIHTEF HHHHHHHHHHCCC >Mature Secondary Structure TSIPANERIGPTQPIEPGQVERNEFEYISLGTQCLLANWHIAKRQIITPSIKATPREVD CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCEECCCCCCCCCCHHH FLQHIEQTIHTEF HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA