Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475030

Identifier: 113475030

GI number: 113475030

Start: 1966978

End: 1967166

Strand: Direct

Name: 113475030

Synonym: Tery_1287

Alternate gene names: NA

Gene position: 1966978-1967166 (Clockwise)

Preceding gene: 113475029

Following gene: 113475031

Centisome position: 25.38

GC content: 41.8

Gene sequence:

>189_bases
GTGGCTCAATGTTGTGGTATTCAGACTGATTTGGGGGTAATACAGAAATCAGGTATTCGAGACTCTATGGTAACTCGTGC
TGCTTTTTTGTCTGACGAGTTTCACCAGATTCGCTTTGTTTATATCCCTAAACATACTTCTTGGCTGAATCAAATTGAGT
GTTGGTTCTCTATTTGGGCCAGGGGTTGA

Upstream 100 bases:

>100_bases
AACACATTGAACAGACTATCCATACTGAATTCTGATGGAGGATGAATTTTTCGGATTAGAGCAACTCAATACTCATAAAT
CTGAATGATTAGTCCGTCAA

Downstream 100 bases:

>100_bases
CTCCGGCGTAGTAGTTTCTCTTCCACCTCAGAGCTCAAGCAGAAGATACTAAATTTTATTGACTATTTCAACTGTACTCT
AGCCAGACCTTGTTGCTGGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MAQCCGIQTDLGVIQKSGIRDSMVTRAAFLSDEFHQIRFVYIPKHTSWLNQIECWFSIWARG

Sequences:

>Translated_62_residues
MAQCCGIQTDLGVIQKSGIRDSMVTRAAFLSDEFHQIRFVYIPKHTSWLNQIECWFSIWARG
>Mature_61_residues
AQCCGIQTDLGVIQKSGIRDSMVTRAAFLSDEFHQIRFVYIPKHTSWLNQIECWFSIWARG

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7191; Mature: 7060

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQCCGIQTDLGVIQKSGIRDSMVTRAAFLSDEFHQIRFVYIPKHTSWLNQIECWFSIWA
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCC
RG
CC
>Mature Secondary Structure 
AQCCGIQTDLGVIQKSGIRDSMVTRAAFLSDEFHQIRFVYIPKHTSWLNQIECWFSIWA
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCC
RG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA