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The map label for this gene is dnaJ [H]

Identifier: 113475002

GI number: 113475002

Start: 1922203

End: 1922877

Strand: Direct

Name: dnaJ [H]

Synonym: Tery_1240

Alternate gene names: 113475002

Gene position: 1922203-1922877 (Clockwise)

Preceding gene: 113474997

Following gene: 113475003

Centisome position: 24.8

GC content: 30.37

Gene sequence:

>675_bases
ATGGTAAGTTCTGACTATTATAAAATCTTAAATGTTCATCCCACTGCAACTCAGGGACAAATTAGACAAGCATATCGTCG
TTTAGTTAAATTATTTCACCCAGATACTAATACAGAAGTAGCAAACCACGAACGTATTATTAGTATTAATGAAGCCTATG
AAGTATTAAGCGATCCTCAACAAAGAAAATCTTATGATCAGCAGCTTAATCAAAATTATCAAAGATATAGAAACATTAGC
CAAGATTACTATAAACACAATAAAAGAAGGCAGAATATTGATGAACATCTGCAAAGATGGATAAATCATGTTTACAGACC
AGTTGATACAATTATAATTCAAATACTAAAACCTCTAAAAAATGAAATTGATGATTTAGCTGCAGATCCATTTGATGATC
AATTACTTGAATCTTTTCAAGATTATTTAGAAACTTCTCGAGGTCTACTTAAAAAAGCTCATAACTTATTTAGTTCTCAG
CCAAACCCATCTAATTTTGCTGGAGTAGCAGCTCATTTATATTATTGTTTGAATCAAGTTAGTGATGGAATAGAAGATTT
AGAATTATTTACTCTAAACTACGATGATTATTATTTACATACAGGTCAGGAATTATTTAGAATTGCTGATAAATTGCGCC
AGGAAGCACAAGCAGCAATAAAAGGTATCTTTTAA

Upstream 100 bases:

>100_bases
TCGCCATTATATGTATGCTATGGGATCGTACTAATACTGATTCAGAAGGTATTTATAGTCGCTATATTTGTTATTGTAGT
TATTGGATAAAAATGGCTCA

Downstream 100 bases:

>100_bases
GTTAGAAGTTAAATTCACAACGCTAATTACATTTGATATTTTACTAACATTCTATTAGTTTAGTTGTCTGAGGTTTAAAT
CACTAAAACTTTCAAAATAA

Product: heat shock protein DnaJ-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVSSDYYKILNVHPTATQGQIRQAYRRLVKLFHPDTNTEVANHERIISINEAYEVLSDPQQRKSYDQQLNQNYQRYRNIS
QDYYKHNKRRQNIDEHLQRWINHVYRPVDTIIIQILKPLKNEIDDLAADPFDDQLLESFQDYLETSRGLLKKAHNLFSSQ
PNPSNFAGVAAHLYYCLNQVSDGIEDLELFTLNYDDYYLHTGQELFRIADKLRQEAQAAIKGIF

Sequences:

>Translated_224_residues
MVSSDYYKILNVHPTATQGQIRQAYRRLVKLFHPDTNTEVANHERIISINEAYEVLSDPQQRKSYDQQLNQNYQRYRNIS
QDYYKHNKRRQNIDEHLQRWINHVYRPVDTIIIQILKPLKNEIDDLAADPFDDQLLESFQDYLETSRGLLKKAHNLFSSQ
PNPSNFAGVAAHLYYCLNQVSDGIEDLELFTLNYDDYYLHTGQELFRIADKLRQEAQAAIKGIF
>Mature_224_residues
MVSSDYYKILNVHPTATQGQIRQAYRRLVKLFHPDTNTEVANHERIISINEAYEVLSDPQQRKSYDQQLNQNYQRYRNIS
QDYYKHNKRRQNIDEHLQRWINHVYRPVDTIIIQILKPLKNEIDDLAADPFDDQLLESFQDYLETSRGLLKKAHNLFSSQ
PNPSNFAGVAAHLYYCLNQVSDGIEDLELFTLNYDDYYLHTGQELFRIADKLRQEAQAAIKGIF

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI201862587, Length=67, Percent_Identity=44.7761194029851, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI201862518, Length=67, Percent_Identity=44.7761194029851, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI56549115, Length=66, Percent_Identity=45.4545454545455, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI56687498, Length=125, Percent_Identity=30.4, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1786197, Length=68, Percent_Identity=48.5294117647059, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787235, Length=67, Percent_Identity=46.2686567164179, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17534355, Length=66, Percent_Identity=42.4242424242424, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=66, Percent_Identity=46.969696969697, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322388, Length=68, Percent_Identity=48.5294117647059, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726398, Length=66, Percent_Identity=43.9393939393939, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 26454; Mature: 26454

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSDYYKILNVHPTATQGQIRQAYRRLVKLFHPDTNTEVANHERIISINEAYEVLSDPQ
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHHHCCHH
QRKSYDQQLNQNYQRYRNISQDYYKHNKRRQNIDEHLQRWINHVYRPVDTIIIQILKPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIDDLAADPFDDQLLESFQDYLETSRGLLKKAHNLFSSQPNPSNFAGVAAHLYYCLNQV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SDGIEDLELFTLNYDDYYLHTGQELFRIADKLRQEAQAAIKGIF
HCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSSDYYKILNVHPTATQGQIRQAYRRLVKLFHPDTNTEVANHERIISINEAYEVLSDPQ
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHHHHHCCHH
QRKSYDQQLNQNYQRYRNISQDYYKHNKRRQNIDEHLQRWINHVYRPVDTIIIQILKPLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEIDDLAADPFDDQLLESFQDYLETSRGLLKKAHNLFSSQPNPSNFAGVAAHLYYCLNQV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SDGIEDLELFTLNYDDYYLHTGQELFRIADKLRQEAQAAIKGIF
HCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA