| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475000
Identifier: 113475000
GI number: 113475000
Start: 1919537
End: 1919836
Strand: Reverse
Name: 113475000
Synonym: Tery_1238
Alternate gene names: NA
Gene position: 1919836-1919537 (Counterclockwise)
Preceding gene: 113475001
Following gene: 113474999
Centisome position: 24.77
GC content: 40.0
Gene sequence:
>300_bases ATGGACAAATCATTTGAGGTCGTCGTAGCAATTGACTTCGGAACATCTCGTTCTGGGTTTGCTTATAAGTTTAAAGAGTC GGACGTTTCTGTCTTTCGAGACCTGTGGCCTGATAACCCCATGTCTTATCCTAAAACCGCAACCTATTTATTGCTTTCTT CTACAGGAGAAGTAGAAGCTTGGGGCTATACAGCAATGAAAAAACTGGCTCAATTTCGTGCTCAGGGAACTGCTAAAGAT TATTACTTTACCCGTAACTTTAAAATGGAGTTACATTCTGGTAAAAAAGACGAAAGTTGA
Upstream 100 bases:
>100_bases CAGAAACTTTACTAGATACTTGGCGAAAGCTGAAGATTAAGGGCTGTATTGGAGTAGATGGACATGGACAAACTTTATTT TGATAAATTAGGTAAATTAG
Downstream 100 bases:
>100_bases CCTTATGTCATTAATAAAAATAACGGAGAAAAAATTTATGTTATTGACTTGATAGCTAAATATATTCGTCTCATTAAAGA CGAAGCTCTCAAGGAAATTA
Product: heat shock 70kD protein 12B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MDKSFEVVVAIDFGTSRSGFAYKFKESDVSVFRDLWPDNPMSYPKTATYLLLSSTGEVEAWGYTAMKKLAQFRAQGTAKD YYFTRNFKMELHSGKKDES
Sequences:
>Translated_99_residues MDKSFEVVVAIDFGTSRSGFAYKFKESDVSVFRDLWPDNPMSYPKTATYLLLSSTGEVEAWGYTAMKKLAQFRAQGTAKD YYFTRNFKMELHSGKKDES >Mature_99_residues MDKSFEVVVAIDFGTSRSGFAYKFKESDVSVFRDLWPDNPMSYPKTATYLLLSSTGEVEAWGYTAMKKLAQFRAQGTAKD YYFTRNFKMELHSGKKDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11348; Mature: 11348
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSFEVVVAIDFGTSRSGFAYKFKESDVSVFRDLWPDNPMSYPKTATYLLLSSTGEVEA CCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEE WGYTAMKKLAQFRAQGTAKDYYFTRNFKMELHSGKKDES CCHHHHHHHHHHHCCCCCCCEEEEECEEEEECCCCCCCC >Mature Secondary Structure MDKSFEVVVAIDFGTSRSGFAYKFKESDVSVFRDLWPDNPMSYPKTATYLLLSSTGEVEA CCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEE WGYTAMKKLAQFRAQGTAKDYYFTRNFKMELHSGKKDES CCHHHHHHHHHHHCCCCCCCEEEEECEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA