| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474979
Identifier: 113474979
GI number: 113474979
Start: 1885361
End: 1885747
Strand: Direct
Name: 113474979
Synonym: Tery_1212
Alternate gene names: NA
Gene position: 1885361-1885747 (Clockwise)
Preceding gene: 113474977
Following gene: 113474980
Centisome position: 24.33
GC content: 40.83
Gene sequence:
>387_bases GTGCGAGCGCAGAGCGCTCGCACTACACCCCTTCCCAGTCCAATAAGCGTTTTCTTTTTGTTGAAATATTCTTCAGTTCC CGAACACAAATTCCTTTCTATATATAGCTTTCAACTAGCTTGTCACCCCGTGAGGATAACTGGTTATGGAAATGTAGAAT TAGCAAAGCGAACTTTAACTAAAGGTGTCTTTGATTTTATAGAGAAGTCTGCCACAGCAGTTGAAGATTTAGTGTCAGCA GTTCAAAGAGCCATAGATACTCGTAAAGAAAAAATAAGGCGAGTGGGAAACCCTTTTACACCAATGACAGGTTTAGAACC TACGGTTTTTGGTGGCAGATGGGAACAGGATTCAAAGTTGAGCGCAATAGGAAAAACCAGAAAATAA
Upstream 100 bases:
>100_bases TTCTTTTTTTTTTGTAATTATTAACCCTTTTTTATCATATTTTTAACAGTTTTTTTTAATGTTTTAATGAATAAATAATC AACCATGGGTAGGGGGTGTA
Downstream 100 bases:
>100_bases TATCACCTAAAGCTTTTTTTAGAGACACTCTCACCAAACTATGGGAAGACATTGAAGATAAAACTGATGTATTTGTCATC CTTCTTGACGATCTAGAAAA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRAQSARTTPLPSPISVFFLLKYSSVPEHKFLSIYSFQLACHPVRITGYGNVELAKRTLTKGVFDFIEKSATAVEDLVSA VQRAIDTRKEKIRRVGNPFTPMTGLEPTVFGGRWEQDSKLSAIGKTRK
Sequences:
>Translated_128_residues MRAQSARTTPLPSPISVFFLLKYSSVPEHKFLSIYSFQLACHPVRITGYGNVELAKRTLTKGVFDFIEKSATAVEDLVSA VQRAIDTRKEKIRRVGNPFTPMTGLEPTVFGGRWEQDSKLSAIGKTRK >Mature_128_residues MRAQSARTTPLPSPISVFFLLKYSSVPEHKFLSIYSFQLACHPVRITGYGNVELAKRTLTKGVFDFIEKSATAVEDLVSA VQRAIDTRKEKIRRVGNPFTPMTGLEPTVFGGRWEQDSKLSAIGKTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14318; Mature: 14318
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQSARTTPLPSPISVFFLLKYSSVPEHKFLSIYSFQLACHPVRITGYGNVELAKRTLT CCCCCCCCCCCCCHHHHHHEEECCCCCCCHHHHHEEHEEEECEEEEECCCCHHHHHHHHH KGVFDFIEKSATAVEDLVSAVQRAIDTRKEKIRRVGNPFTPMTGLEPTVFGGRWEQDSKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH SAIGKTRK HHCCCCCC >Mature Secondary Structure MRAQSARTTPLPSPISVFFLLKYSSVPEHKFLSIYSFQLACHPVRITGYGNVELAKRTLT CCCCCCCCCCCCCHHHHHHEEECCCCCCCHHHHHEEHEEEECEEEEECCCCHHHHHHHHH KGVFDFIEKSATAVEDLVSAVQRAIDTRKEKIRRVGNPFTPMTGLEPTVFGGRWEQDSKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH SAIGKTRK HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA