| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is atoS [C]
Identifier: 113474977
GI number: 113474977
Start: 1883036
End: 1883473
Strand: Direct
Name: atoS [C]
Synonym: Tery_1209
Alternate gene names: 113474977
Gene position: 1883036-1883473 (Clockwise)
Preceding gene: 113474974
Following gene: 113474979
Centisome position: 24.3
GC content: 29.45
Gene sequence:
>438_bases ATGAAACCTATTGACATTGAGAAACTAATAGGTGAGGTTGAGCTTTTGTCTAGGCACAGATTACCTTCAAATATAAAAAT GGAAGTTAAGATACAGGAAAATTTGAAAGGTCGAACTATTCTAGGAAATTTTGATCAAATTAAGAGTGTATTGTTTGAAC TGATTAGAAATTCTACAAAGGTATTACATAAACCAGATAGTAAAATCCAAATATTTGCAAGTTATGAAAATGATGGATTG ATTACTTTATCTATTAAAGATAATGGCTCTAGTATTGAGGATGGTTTAAAAAAGAAACTGTTCAAAGAAATCGTAGATAG CGAAAGTGGTTCTGATATAGGATTGTATATCATTAACAGAATTATACATCAAATAGGAGGTGATTTAAAACTAACATCTT CGGAGGAAGGAACTACTATTACTCTTTTTTTTTCATGA
Upstream 100 bases:
>100_bases GGAAATTTTAGAGGAATGTGAACTAATTAAAAGAAGTCTTGAACATAGGCAGATTCGTCTACAAATGTTGATAGATTATC TGAATCTAGGTAAGCAAAAG
Downstream 100 bases:
>100_bases GAGTTGAATTTATAAAATATATAAATTTGTAAGTTCAACTATAACATTTTTCCAAACTTTTATTTTATGGGTTTTAGAAA TTATGGTATTGAGAATATTA
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKPIDIEKLIGEVELLSRHRLPSNIKMEVKIQENLKGRTILGNFDQIKSVLFELIRNSTKVLHKPDSKIQIFASYENDGL ITLSIKDNGSSIEDGLKKKLFKEIVDSESGSDIGLYIINRIIHQIGGDLKLTSSEEGTTITLFFS
Sequences:
>Translated_145_residues MKPIDIEKLIGEVELLSRHRLPSNIKMEVKIQENLKGRTILGNFDQIKSVLFELIRNSTKVLHKPDSKIQIFASYENDGL ITLSIKDNGSSIEDGLKKKLFKEIVDSESGSDIGLYIINRIIHQIGGDLKLTSSEEGTTITLFFS >Mature_145_residues MKPIDIEKLIGEVELLSRHRLPSNIKMEVKIQENLKGRTILGNFDQIKSVLFELIRNSTKVLHKPDSKIQIFASYENDGL ITLSIKDNGSSIEDGLKKKLFKEIVDSESGSDIGLYIINRIIHQIGGDLKLTSSEEGTTITLFFS
Specific function: Member Of The Two-Component Regulatory System Atos/Atoc; May Activate Atoc By Phosphorylation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 16301; Mature: 16301
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIDIEKLIGEVELLSRHRLPSNIKMEVKIQENLKGRTILGNFDQIKSVLFELIRNSTK CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHCCHH VLHKPDSKIQIFASYENDGLITLSIKDNGSSIEDGLKKKLFKEIVDSESGSDIGLYIINR EEECCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IIHQIGGDLKLTSSEEGTTITLFFS HHHHCCCCEEEECCCCCCEEEEEEC >Mature Secondary Structure MKPIDIEKLIGEVELLSRHRLPSNIKMEVKIQENLKGRTILGNFDQIKSVLFELIRNSTK CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHCCHH VLHKPDSKIQIFASYENDGLITLSIKDNGSSIEDGLKKKLFKEIVDSESGSDIGLYIINR EEECCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IIHQIGGDLKLTSSEEGTTITLFFS HHHHCCCCEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA