Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474957

Identifier: 113474957

GI number: 113474957

Start: 1858962

End: 1860110

Strand: Reverse

Name: 113474957

Synonym: Tery_1187

Alternate gene names: NA

Gene position: 1860110-1858962 (Counterclockwise)

Preceding gene: 113474958

Following gene: 113474956

Centisome position: 24.0

GC content: 41.25

Gene sequence:

>1149_bases
TTGACGGAGGAACTTCAAGCTCAAACTGGAATTACACACATTTGCCCGCAGTCAGATGATGTAGGTTTATTCAAAACTGA
GAGTTTGGCGATCGCTCAATATTTTGCAGACCAGGAAAGACATGATTTAATCCGAACAACTTGTATTGATATGGGAGGTG
GAACTTCAGATATTTCGGTTTGGTACAACAACGAGCTCATTCATCAATGTTCGGTTTTATTGGCTGGTCGTCATTTGTTG
TCGAATTTTTTAGAATTGAATCCAAATTTTTTCTCCCAGCTATTCGAGCAGAATTTGAAAGACTGGGATCGATTAACTGA
AGACAAGTTTAGTGCCAAGCTGGATGTATTTCTACGCCTGGAAAGTGAAAAGTGGCTGAAGAATAAAAGGGATTTTGCAG
AGGACGATCCGAAGTTTCAAGGTTTGCTCCGGCTGATGGCAATTGGTATGGGGGGATTGTATTACTATGTGGGGACAATC
TTGGGAGTTCTTGAACAAGAGGAAAAATACAAGAGTCGCGAAATTACTCCTGTTTATATTGGCGGAAATGGTTCTCGATT
GTTAAACTGGTTAGCTGAAAGGGGTAAATTTCTTCCTTCTTCGGAAGTTAACGAGCTGCTGAGTCAGATGTTGACTAAAG
GCTCTGGATTTGATGATCGCATATTGGAAAAAACGAGATTGAGTCAGAGACCAAAAGACGAGGTAGCTTGTGGTTTGGTC
TTGGGTCGTACTAAGTTGACAGGATTAGGGAGGAAAACTAAAGATCCGTTGATTGCAGGAGAGGATTGTGAAATTAATGG
TAATCCCATCAACTGGAGAGAACGCTTGGAGTTTGAGGGAAATATTCGGGAGTTAAAAATTCCTGATTTAGTACAGTTAA
GAACGTTTCTAGATGATTTTCATGTATCTTTGAAGGAGTTGGAGATTGAGGAAATTCTCCCGCTACAGGATTATGAACTG
GGGAACGAGCCAGGGGCAGAACCAGAATCTACTTATAACCAGACTCTTTGGCGAAATACCCAGAGGGAGTTGACAAATGT
TTTGTTGAATATGAAGGGAGAAACGGATGATATTCGTGTGGAACCGCCTTTTATTATGGGGCTGAAGGCTTTATTACATG
TTTTAGCTAAGGAGTGGGCAGGTAAGTAG

Upstream 100 bases:

>100_bases
TGCCGCCAAGGAAGGAGTCAAACAAATTCAGTGGTGTATTTCCTATCCTACGGCTTTTTCTCGTCGTGATAAAAATAGGT
ATGCGAAGACTTAGCAAGAT

Downstream 100 bases:

>100_bases
GTGGTCTAATTCTGACTAGAATCTCAATACTGGCAGCCAGAAATTAGGCTGCTAGGGATACTACTAGATATGTCTGAATC
TGCAATCATATTAATTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTEELQAQTGITHICPQSDDVGLFKTESLAIAQYFADQERHDLIRTTCIDMGGGTSDISVWYNNELIHQCSVLLAGRHLL
SNFLELNPNFFSQLFEQNLKDWDRLTEDKFSAKLDVFLRLESEKWLKNKRDFAEDDPKFQGLLRLMAIGMGGLYYYVGTI
LGVLEQEEKYKSREITPVYIGGNGSRLLNWLAERGKFLPSSEVNELLSQMLTKGSGFDDRILEKTRLSQRPKDEVACGLV
LGRTKLTGLGRKTKDPLIAGEDCEINGNPINWRERLEFEGNIRELKIPDLVQLRTFLDDFHVSLKELEIEEILPLQDYEL
GNEPGAEPESTYNQTLWRNTQRELTNVLLNMKGETDDIRVEPPFIMGLKALLHVLAKEWAGK

Sequences:

>Translated_382_residues
MTEELQAQTGITHICPQSDDVGLFKTESLAIAQYFADQERHDLIRTTCIDMGGGTSDISVWYNNELIHQCSVLLAGRHLL
SNFLELNPNFFSQLFEQNLKDWDRLTEDKFSAKLDVFLRLESEKWLKNKRDFAEDDPKFQGLLRLMAIGMGGLYYYVGTI
LGVLEQEEKYKSREITPVYIGGNGSRLLNWLAERGKFLPSSEVNELLSQMLTKGSGFDDRILEKTRLSQRPKDEVACGLV
LGRTKLTGLGRKTKDPLIAGEDCEINGNPINWRERLEFEGNIRELKIPDLVQLRTFLDDFHVSLKELEIEEILPLQDYEL
GNEPGAEPESTYNQTLWRNTQRELTNVLLNMKGETDDIRVEPPFIMGLKALLHVLAKEWAGK
>Mature_381_residues
TEELQAQTGITHICPQSDDVGLFKTESLAIAQYFADQERHDLIRTTCIDMGGGTSDISVWYNNELIHQCSVLLAGRHLLS
NFLELNPNFFSQLFEQNLKDWDRLTEDKFSAKLDVFLRLESEKWLKNKRDFAEDDPKFQGLLRLMAIGMGGLYYYVGTIL
GVLEQEEKYKSREITPVYIGGNGSRLLNWLAERGKFLPSSEVNELLSQMLTKGSGFDDRILEKTRLSQRPKDEVACGLVL
GRTKLTGLGRKTKDPLIAGEDCEINGNPINWRERLEFEGNIRELKIPDLVQLRTFLDDFHVSLKELEIEEILPLQDYELG
NEPGAEPESTYNQTLWRNTQRELTNVLLNMKGETDDIRVEPPFIMGLKALLHVLAKEWAGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43701; Mature: 43570

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEELQAQTGITHICPQSDDVGLFKTESLAIAQYFADQERHDLIRTTCIDMGGGTSDISV
CCCHHHHHCCCCEECCCCCCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEE
WYNNELIHQCSVLLAGRHLLSNFLELNPNFFSQLFEQNLKDWDRLTEDKFSAKLDVFLRL
EECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE
ESEKWLKNKRDFAEDDPKFQGLLRLMAIGMGGLYYYVGTILGVLEQEEKYKSREITPVYI
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
GGNGSRLLNWLAERGKFLPSSEVNELLSQMLTKGSGFDDRILEKTRLSQRPKDEVACGLV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH
LGRTKLTGLGRKTKDPLIAGEDCEINGNPINWRERLEFEGNIRELKIPDLVQLRTFLDDF
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHH
HVSLKELEIEEILPLQDYELGNEPGAEPESTYNQTLWRNTQRELTNVLLNMKGETDDIRV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
EPPFIMGLKALLHVLAKEWAGK
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEELQAQTGITHICPQSDDVGLFKTESLAIAQYFADQERHDLIRTTCIDMGGGTSDISV
CCHHHHHCCCCEECCCCCCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEE
WYNNELIHQCSVLLAGRHLLSNFLELNPNFFSQLFEQNLKDWDRLTEDKFSAKLDVFLRL
EECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE
ESEKWLKNKRDFAEDDPKFQGLLRLMAIGMGGLYYYVGTILGVLEQEEKYKSREITPVYI
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
GGNGSRLLNWLAERGKFLPSSEVNELLSQMLTKGSGFDDRILEKTRLSQRPKDEVACGLV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHH
LGRTKLTGLGRKTKDPLIAGEDCEINGNPINWRERLEFEGNIRELKIPDLVQLRTFLDDF
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHH
HVSLKELEIEEILPLQDYELGNEPGAEPESTYNQTLWRNTQRELTNVLLNMKGETDDIRV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
EPPFIMGLKALLHVLAKEWAGK
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA