Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474958

Identifier: 113474958

GI number: 113474958

Start: 1860117

End: 1862237

Strand: Reverse

Name: 113474958

Synonym: Tery_1188

Alternate gene names: NA

Gene position: 1862237-1860117 (Counterclockwise)

Preceding gene: 113474959

Following gene: 113474957

Centisome position: 24.03

GC content: 44.22

Gene sequence:

>2121_bases
ATGACAGGAACACAAGTCAACAAAAGTTACGTTTTAGTCCTGCCCAAGTTAAAGCGGGATAGTGATGTGAAATCCAGCGA
TACTCCTGGTAAATGGGAGGCACAACCAGCAAAAGCCTTTCAAGATGTGGCCTCTAGTCTGGATTATCAAGCTCCAGGAG
AAATGAAAAGTGTTAGCTCTGTACCGACTATGTGGGCTCGTCCCTTATCCATGGAGATGGCTTTACATAATCCCTATTAT
CCCATCCGAGATAAAATGGTCCAACAGTGGCAGGGGATGTTGGCGGCGGTTGCTTTGGCAGAAGTACGCCGCTTTCCCAT
AACTGCTCAATTTTTAGACTTGGGGCTAGAAAAAGACCAAAATCCTTTCGCCCGTTCTCTATACGAACTGCTACCGGATC
CAGTTAATGCCCTGTATGCCTTAGAAACCAAAAATCCCTGGCAAGACATTTATATATTTCTGTGGTATGGTATACTTGTG
GGTCTTACTACTCCTAGTACTATAGTGGCCCCCTCTGAAGAAGGAAAATGGAATGGCTTGCCTTGGTGGAACAAACTGAC
GGGTCAGTTGGAGTCTCCTCAACCACATCTCAATGTCAGCGAGAAGGCTCTCCTCTGGCGCTGGTTAGAAAATTTGCGGG
GAATTTTAGGCGATACTTCCTATGAGGGCCAAGCAGAGGCAATTGATGCGATCGGCGGATTGCTAGATGACTTCCAAAAT
AGTTTGGGGCCTCGCCCAATGGACCAGGGCCTGAGTTTGAGCAATAATCCTCAGTTTTTTGGTGTGGCCATTAATCGAGG
GGTGTTGGAAGGTATTAATCGTCCGGTGAAAGCTGAGGCTCAGTCTTCTTGGGTTCGCTTAGTTCCTAGTAAGAATAAGG
GGCAGGTAAAACCTCTATTGATTATTGACCAGAACATTTCTTCAGCTTGGGGAAAACCGCCTCAAGATATTTGGATACAC
GAGGAGCAAACTCTGGCTTCCCTACAAATACAAGACTTGCGTGAAAAGAAAATTACTTGGCCAGATGTTGAGTGGAAGGA
GTCCAAGGATTTATTTATGGAAGAATTTCGGTTTGTAGACCAAGAAGATGCTCTACCGGGAGCTTTCCTACCTCCGGGGA
CGAAGTTAATTTTTCAGGGTAAAAGTATTACGCCCCTGATACCTATCAATCCTATACTTCTCGACTATTTTACTCCGGAA
GATTTAATCGCTAAGGTCGAGTTTGCTCAAATAAATAGTAGTGATGGACCTCAAGTGCGGGTAACCCTGGACTTGCCTTT
GTCAGGGATGAAAGATGACCCTCGGCAACCTCAGAATTATCGGATTTCCAAAGATTATCCCATAGAAGATAAAAATGCTT
TGCCGGAAGTTCCGGTATTGGAAGTATGGCCTAATTTCCTGGCGGATGGATGGCGCTCTTATTATGCTTTTTATTACGAT
GCTGAATTTGGAGAGGATACTTTTCAAGTGTTTCTACCGGAAGCGAAAGATCGTCATCCTTTTATAGATGGTAGGGGTGC
TTATCAAATAACTCACCTAGAAGAATTTCCTAGTTTCATTGAGTGTCAGGATAGTTCTGGAAGTCCCATTGGCTTGATTC
TGCTGAAAAGTCCAGAGAAAATTAGGCTGGGAGAACGATGGAAAGTGGGGGTAGATTTCGGCACTTCTTTCACCAATATC
TATGTCAATAGTAACGGTTTATCGGAGCCATTGAAGTTGGAAAATTTGCACTTGAAGGTGACGGAGGTTTTGACAGAAAC
CCGCAGGCCTGTATTGTTTGAATACTTTGTCCCGGAAAGCTTTATCCCGACTGACAAACCGTTACCCTTGTCTAGCGTGC
TGACAACTAGGGGGAAGCCAAATAAGACGGAAAACCTAGATTTCCCAATTATTGATGGCAGGATATATATTCCTGATCGC
AACAGGTTTGAACCGCTCAGGGGATGGATAGAAACAGACTTGAAGTGGAAAAATTACCATCCTAACAAATTGTTTTTGAA
ACATTTAGCCTTACATGTAAGCGCGGTTGCCGCCAAGGAAGGAGTCAAACAAATTCAGTGGTGTATTTCCTATCCTACGG
CTTTTTCTCGTCGTGATAAAAATAGGTATGCGAAGACTTAG

Upstream 100 bases:

>100_bases
AATCAGGTTTCAAGCCTCCCTTTTGAAGGGGATGAAAAAAATGTCATAGGTATTTCAAGCCTCTGGCTTTAGCTGTCGAT
ACTGATAACTGATAACTGAT

Downstream 100 bases:

>100_bases
CAAGATTTGACGGAGGAACTTCAAGCTCAAACTGGAATTACACACATTTGCCCGCAGTCAGATGATGTAGGTTTATTCAA
AACTGAGAGTTTGGCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 706; Mature: 705

Protein sequence:

>706_residues
MTGTQVNKSYVLVLPKLKRDSDVKSSDTPGKWEAQPAKAFQDVASSLDYQAPGEMKSVSSVPTMWARPLSMEMALHNPYY
PIRDKMVQQWQGMLAAVALAEVRRFPITAQFLDLGLEKDQNPFARSLYELLPDPVNALYALETKNPWQDIYIFLWYGILV
GLTTPSTIVAPSEEGKWNGLPWWNKLTGQLESPQPHLNVSEKALLWRWLENLRGILGDTSYEGQAEAIDAIGGLLDDFQN
SLGPRPMDQGLSLSNNPQFFGVAINRGVLEGINRPVKAEAQSSWVRLVPSKNKGQVKPLLIIDQNISSAWGKPPQDIWIH
EEQTLASLQIQDLREKKITWPDVEWKESKDLFMEEFRFVDQEDALPGAFLPPGTKLIFQGKSITPLIPINPILLDYFTPE
DLIAKVEFAQINSSDGPQVRVTLDLPLSGMKDDPRQPQNYRISKDYPIEDKNALPEVPVLEVWPNFLADGWRSYYAFYYD
AEFGEDTFQVFLPEAKDRHPFIDGRGAYQITHLEEFPSFIECQDSSGSPIGLILLKSPEKIRLGERWKVGVDFGTSFTNI
YVNSNGLSEPLKLENLHLKVTEVLTETRRPVLFEYFVPESFIPTDKPLPLSSVLTTRGKPNKTENLDFPIIDGRIYIPDR
NRFEPLRGWIETDLKWKNYHPNKLFLKHLALHVSAVAAKEGVKQIQWCISYPTAFSRRDKNRYAKT

Sequences:

>Translated_706_residues
MTGTQVNKSYVLVLPKLKRDSDVKSSDTPGKWEAQPAKAFQDVASSLDYQAPGEMKSVSSVPTMWARPLSMEMALHNPYY
PIRDKMVQQWQGMLAAVALAEVRRFPITAQFLDLGLEKDQNPFARSLYELLPDPVNALYALETKNPWQDIYIFLWYGILV
GLTTPSTIVAPSEEGKWNGLPWWNKLTGQLESPQPHLNVSEKALLWRWLENLRGILGDTSYEGQAEAIDAIGGLLDDFQN
SLGPRPMDQGLSLSNNPQFFGVAINRGVLEGINRPVKAEAQSSWVRLVPSKNKGQVKPLLIIDQNISSAWGKPPQDIWIH
EEQTLASLQIQDLREKKITWPDVEWKESKDLFMEEFRFVDQEDALPGAFLPPGTKLIFQGKSITPLIPINPILLDYFTPE
DLIAKVEFAQINSSDGPQVRVTLDLPLSGMKDDPRQPQNYRISKDYPIEDKNALPEVPVLEVWPNFLADGWRSYYAFYYD
AEFGEDTFQVFLPEAKDRHPFIDGRGAYQITHLEEFPSFIECQDSSGSPIGLILLKSPEKIRLGERWKVGVDFGTSFTNI
YVNSNGLSEPLKLENLHLKVTEVLTETRRPVLFEYFVPESFIPTDKPLPLSSVLTTRGKPNKTENLDFPIIDGRIYIPDR
NRFEPLRGWIETDLKWKNYHPNKLFLKHLALHVSAVAAKEGVKQIQWCISYPTAFSRRDKNRYAKT
>Mature_705_residues
TGTQVNKSYVLVLPKLKRDSDVKSSDTPGKWEAQPAKAFQDVASSLDYQAPGEMKSVSSVPTMWARPLSMEMALHNPYYP
IRDKMVQQWQGMLAAVALAEVRRFPITAQFLDLGLEKDQNPFARSLYELLPDPVNALYALETKNPWQDIYIFLWYGILVG
LTTPSTIVAPSEEGKWNGLPWWNKLTGQLESPQPHLNVSEKALLWRWLENLRGILGDTSYEGQAEAIDAIGGLLDDFQNS
LGPRPMDQGLSLSNNPQFFGVAINRGVLEGINRPVKAEAQSSWVRLVPSKNKGQVKPLLIIDQNISSAWGKPPQDIWIHE
EQTLASLQIQDLREKKITWPDVEWKESKDLFMEEFRFVDQEDALPGAFLPPGTKLIFQGKSITPLIPINPILLDYFTPED
LIAKVEFAQINSSDGPQVRVTLDLPLSGMKDDPRQPQNYRISKDYPIEDKNALPEVPVLEVWPNFLADGWRSYYAFYYDA
EFGEDTFQVFLPEAKDRHPFIDGRGAYQITHLEEFPSFIECQDSSGSPIGLILLKSPEKIRLGERWKVGVDFGTSFTNIY
VNSNGLSEPLKLENLHLKVTEVLTETRRPVLFEYFVPESFIPTDKPLPLSSVLTTRGKPNKTENLDFPIIDGRIYIPDRN
RFEPLRGWIETDLKWKNYHPNKLFLKHLALHVSAVAAKEGVKQIQWCISYPTAFSRRDKNRYAKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80375; Mature: 80244

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTQVNKSYVLVLPKLKRDSDVKSSDTPGKWEAQPAKAFQDVASSLDYQAPGEMKSVSS
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHC
VPTMWARPLSMEMALHNPYYPIRDKMVQQWQGMLAAVALAEVRRFPITAQFLDLGLEKDQ
CCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
NPFARSLYELLPDPVNALYALETKNPWQDIYIFLWYGILVGLTTPSTIVAPSEEGKWNGL
CHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
PWWNKLTGQLESPQPHLNVSEKALLWRWLENLRGILGDTSYEGQAEAIDAIGGLLDDFQN
CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SLGPRPMDQGLSLSNNPQFFGVAINRGVLEGINRPVKAEAQSSWVRLVPSKNKGQVKPLL
HCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEE
IIDQNISSAWGKPPQDIWIHEEQTLASLQIQDLREKKITWPDVEWKESKDLFMEEFRFVD
EEECCCHHHCCCCCHHEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
QEDALPGAFLPPGTKLIFQGKSITPLIPINPILLDYFTPEDLIAKVEFAQINSSDGPQVR
CCCCCCCCCCCCCCEEEECCCCCCCEECCCCEEEECCCCHHHHHEEEEEECCCCCCCEEE
VTLDLPLSGMKDDPRQPQNYRISKDYPIEDKNALPEVPVLEVWPNFLADGWRSYYAFYYD
EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEE
AEFGEDTFQVFLPEAKDRHPFIDGRGAYQITHLEEFPSFIECQDSSGSPIGLILLKSPEK
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCEEECCCCCCCEEEEEECCCCC
IRLGERWKVGVDFGTSFTNIYVNSNGLSEPLKLENLHLKVTEVLTETRRPVLFEYFVPES
EECCCEEEEEEEECCCEEEEEECCCCCCCCEEECCEEEHHHHHHHHCCCCEEEEEECCCC
FIPTDKPLPLSSVLTTRGKPNKTENLDFPIIDGRIYIPDRNRFEPLRGWIETDLKWKNYH
CCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHHCCCEECCCC
PNKLFLKHLALHVSAVAAKEGVKQIQWCISYPTAFSRRDKNRYAKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCC
>Mature Secondary Structure 
TGTQVNKSYVLVLPKLKRDSDVKSSDTPGKWEAQPAKAFQDVASSLDYQAPGEMKSVSS
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHC
VPTMWARPLSMEMALHNPYYPIRDKMVQQWQGMLAAVALAEVRRFPITAQFLDLGLEKDQ
CCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
NPFARSLYELLPDPVNALYALETKNPWQDIYIFLWYGILVGLTTPSTIVAPSEEGKWNGL
CHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
PWWNKLTGQLESPQPHLNVSEKALLWRWLENLRGILGDTSYEGQAEAIDAIGGLLDDFQN
CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SLGPRPMDQGLSLSNNPQFFGVAINRGVLEGINRPVKAEAQSSWVRLVPSKNKGQVKPLL
HCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEE
IIDQNISSAWGKPPQDIWIHEEQTLASLQIQDLREKKITWPDVEWKESKDLFMEEFRFVD
EEECCCHHHCCCCCHHEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
QEDALPGAFLPPGTKLIFQGKSITPLIPINPILLDYFTPEDLIAKVEFAQINSSDGPQVR
CCCCCCCCCCCCCCEEEECCCCCCCEECCCCEEEECCCCHHHHHEEEEEECCCCCCCEEE
VTLDLPLSGMKDDPRQPQNYRISKDYPIEDKNALPEVPVLEVWPNFLADGWRSYYAFYYD
EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEE
AEFGEDTFQVFLPEAKDRHPFIDGRGAYQITHLEEFPSFIECQDSSGSPIGLILLKSPEK
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCEEECCCCCCCEEEEEECCCCC
IRLGERWKVGVDFGTSFTNIYVNSNGLSEPLKLENLHLKVTEVLTETRRPVLFEYFVPES
EECCCEEEEEEEECCCEEEEEECCCCCCCCEEECCEEEHHHHHHHHCCCCEEEEEECCCC
FIPTDKPLPLSSVLTTRGKPNKTENLDFPIIDGRIYIPDRNRFEPLRGWIETDLKWKNYH
CCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHHCCCEECCCC
PNKLFLKHLALHVSAVAAKEGVKQIQWCISYPTAFSRRDKNRYAKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA