Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474956

Identifier: 113474956

GI number: 113474956

Start: 1857687

End: 1858649

Strand: Reverse

Name: 113474956

Synonym: Tery_1186

Alternate gene names: NA

Gene position: 1858649-1857687 (Counterclockwise)

Preceding gene: 113474957

Following gene: 113474955

Centisome position: 23.98

GC content: 36.55

Gene sequence:

>963_bases
ATGAGTAACTGTCCACAGTGCCAGGCTGAAGTAAACAAGGGCGATAATTTTTGTCGGAATTGTGGTTATGCTCTGCATGA
TAGTTTAACTGGCGATAAACCTCAAGGGTTTGAAAATATTAGAGAAACATCAGCACATGCTGCAACTTGGGAGCATAACA
TAAAAGAGCAATTGGTTCAAATGTTAGAATCGTTCAAATCTCAATTGCAAGAACTAACTCAGAAGCAGAACAACAATACT
GCTTCTTTAGAGGCAGAAAGAGAAGAAATTAACCAAATTAATAATGAGAACTCAAAACTCCAAGAGGAGTTGCAAGAACT
AATTCAGAAGCAGAACAACAATACTGCTTCTTTAGAGGCAGGAAGAGAAGAAATTAACCAAATTAATAATGAGATCTCAA
AACTCCAAGATGAGTTGAGGCCTATCAAAAAGTTGATTAGTTTGTTTGGAGAATGGTTCAAAAATAATCCAGAATATCTG
CCATTGAGCACAACGATAGACCCGCAAGTAAAGTTGCAAACATCTACAGAACTAAATACCACCAGAGAAGTAGAGGAGGA
AGGAAAATATCAATTACCTCTGAGTGAAGAAGAACAGTTGTTAAAAGACTACAAGGACGAAGAAAAACGTACTGTTTTAT
CACAAAATGCGATAACTGTTTCAGCAGCAACAGAGAGTATTGATAACAGTCGTTTAGGTATTGGTAAATCAGTTCTGGAA
AAAAAGCGCCGGGGCAACTATTGGATATTAAAACAAGGTAGTTCGCAGTATTTAGTTCCTAGCGATACAATAAAGATTAA
TGAATATAGCATCGATACTCTGAAAAATTTGTTTGAGTGTCAAGGTGTCAATAGTGAAGGATCTAAGGGTAAATTTGAAC
TATTAAAGCCTGCTAAAGTTTCTTCTATTGGAGAAGAAAAGTGGCAACTGTCCGAGCCAGGGAAACTGGAATTTATTGGT
TAA

Upstream 100 bases:

>100_bases
GTAGGGTGTGTTAGATAGCTTTAATGACTAGCTGTAAAAATGATTTAATAATTCGTCACAATATACCATTTTAGAGAAGT
TAAGGAGCTTAGTAGGAAAT

Downstream 100 bases:

>100_bases
TTTATTGAACTAAGAGGTTAGTTATCATGTGGAAAAGCATATATAGTTGGAAAAGCACATACAGTTTATTGCTGTCTTTG
GTATTAATGTCTGGTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSNCPQCQAEVNKGDNFCRNCGYALHDSLTGDKPQGFENIRETSAHAATWEHNIKEQLVQMLESFKSQLQELTQKQNNNT
ASLEAEREEINQINNENSKLQEELQELIQKQNNNTASLEAGREEINQINNEISKLQDELRPIKKLISLFGEWFKNNPEYL
PLSTTIDPQVKLQTSTELNTTREVEEEGKYQLPLSEEEQLLKDYKDEEKRTVLSQNAITVSAATESIDNSRLGIGKSVLE
KKRRGNYWILKQGSSQYLVPSDTIKINEYSIDTLKNLFECQGVNSEGSKGKFELLKPAKVSSIGEEKWQLSEPGKLEFIG

Sequences:

>Translated_320_residues
MSNCPQCQAEVNKGDNFCRNCGYALHDSLTGDKPQGFENIRETSAHAATWEHNIKEQLVQMLESFKSQLQELTQKQNNNT
ASLEAEREEINQINNENSKLQEELQELIQKQNNNTASLEAGREEINQINNEISKLQDELRPIKKLISLFGEWFKNNPEYL
PLSTTIDPQVKLQTSTELNTTREVEEEGKYQLPLSEEEQLLKDYKDEEKRTVLSQNAITVSAATESIDNSRLGIGKSVLE
KKRRGNYWILKQGSSQYLVPSDTIKINEYSIDTLKNLFECQGVNSEGSKGKFELLKPAKVSSIGEEKWQLSEPGKLEFIG
>Mature_319_residues
SNCPQCQAEVNKGDNFCRNCGYALHDSLTGDKPQGFENIRETSAHAATWEHNIKEQLVQMLESFKSQLQELTQKQNNNTA
SLEAEREEINQINNENSKLQEELQELIQKQNNNTASLEAGREEINQINNEISKLQDELRPIKKLISLFGEWFKNNPEYLP
LSTTIDPQVKLQTSTELNTTREVEEEGKYQLPLSEEEQLLKDYKDEEKRTVLSQNAITVSAATESIDNSRLGIGKSVLEK
KRRGNYWILKQGSSQYLVPSDTIKINEYSIDTLKNLFECQGVNSEGSKGKFELLKPAKVSSIGEEKWQLSEPGKLEFIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36432; Mature: 36301

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNCPQCQAEVNKGDNFCRNCGYALHDSLTGDKPQGFENIRETSAHAATWEHNIKEQLVQ
CCCCCCHHHHHCCCHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLESFKSQLQELTQKQNNNTASLEAEREEINQINNENSKLQEELQELIQKQNNNTASLEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
GREEINQINNEISKLQDELRPIKKLISLFGEWFKNNPEYLPLSTTIDPQVKLQTSTELNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCH
TREVEEEGKYQLPLSEEEQLLKDYKDEEKRTVLSQNAITVSAATESIDNSRLGIGKSVLE
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHHH
KKRRGNYWILKQGSSQYLVPSDTIKINEYSIDTLKNLFECQGVNSEGSKGKFELLKPAKV
HHHCCCEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHH
SSIGEEKWQLSEPGKLEFIG
HHCCCHHCCCCCCCCEEECC
>Mature Secondary Structure 
SNCPQCQAEVNKGDNFCRNCGYALHDSLTGDKPQGFENIRETSAHAATWEHNIKEQLVQ
CCCCCHHHHHCCCHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLESFKSQLQELTQKQNNNTASLEAEREEINQINNENSKLQEELQELIQKQNNNTASLEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
GREEINQINNEISKLQDELRPIKKLISLFGEWFKNNPEYLPLSTTIDPQVKLQTSTELNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCH
TREVEEEGKYQLPLSEEEQLLKDYKDEEKRTVLSQNAITVSAATESIDNSRLGIGKSVLE
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHHH
KKRRGNYWILKQGSSQYLVPSDTIKINEYSIDTLKNLFECQGVNSEGSKGKFELLKPAKV
HHHCCCEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHH
SSIGEEKWQLSEPGKLEFIG
HHCCCHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA