Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474955

Identifier: 113474955

GI number: 113474955

Start: 1855867

End: 1857660

Strand: Reverse

Name: 113474955

Synonym: Tery_1185

Alternate gene names: NA

Gene position: 1857660-1855867 (Counterclockwise)

Preceding gene: 113474956

Following gene: 113474954

Centisome position: 23.97

GC content: 33.05

Gene sequence:

>1794_bases
ATGTGGAAAAGCATATATAGTTGGAAAAGCACATACAGTTTATTGCTGTCTTTGGTATTAATGTCTGGTTCTTTAGTGGC
TTGTGTACAAACAGATCCAAACACAATACTTACTAGTCCTTCGATAACATCAAGTCCTTTAAATCCAGATCAGGGAAATT
TAGATCAGGAAAATTTAAAGAACAGCTTTGATGATATTCAAAAAACAAACGATGAATTTCAAACATTATTAGACGATTTT
ATTAAGGACATTGCTGCAGTAAGAGAGGGTTCCAAAAATAGGGAATCAGTAAATAGTTCTAAGGTTAATGAAAAACTAAT
ACAACTGGAAGAAAAAGTTAATACGTATAAAAATCAAATTTCGCAAATAAGAAATCAAGAAAATTTAGAGCAAAATTTTA
ATAGCATAAATCAAAATATTAGTAACATTAAAGAAATAACTGAAAAATTAAAAGGTGGATTAGGCAAAGACAAAATTGGT
GAAGTCCAACTAAATTTGCAGATTATTACAAATCCGGAAGTATCTTATTTTGGACGCTTAGGTCCAGATACGCAAAGTAA
AATAAATGAGTCATTGACAGAAAACAGCAAACAGCTAAAAGCTAAAATTATCGATCTTGGTCAAGTTACTGGTTTACCTT
CATCTGTTACCCTCGATAAAGATGATGACAAAGAATTGGCTAGAAAAATAGCTGATTTGGAAGCAAGAAATAATGAATTA
GCCGCTATAGCTAAGAAGAATGAGGAAGAAATTAAGAATTTAAACTCTGAAAAACAAGAAATTTATAATCAATTAAATCA
GTTTCAAAGTAGACTAAAATTAGAGACATTTGTTGTCATAATAGTGCTGGTAATAGCTGTATTTTTAAGTGGTTTATGTG
TTTATATTTGGCAAGATTGGAGGAGAATAAAGCTGCTTTTGAAAAGATATAACAAAGCTTATACAAATACCAAACAACCG
AATAATGGTGTTAATCAAACTGGTGATTTAGATACTCAAGAACTTGTTTATGAAGTAGACGATAAAGTAGAAGATGCTTA
TGATAAATTAGAAAAAATGTCTAAAATCTGGGAGAATGAAGCGAAAAAAATACAAAGTCAAATATACTATCTCCAACAAA
ATCAGCAAGTCAAGACTCCAGGTAATAATGTCGATAATAGAAAGTTGATTGTTCAAGTAGTAAATGAGAAAATAGGGGAG
ATTTATAGGCAATTACAACAAGAAATTGATCAAAGATGGGATATTGAATCAAGGAACCTACAAAATCAAATAAACCAGCT
CCAACAAAATCAGAAACTAAGGACTTCAGACAATGTAGCTGGAGTTCACAGAGAATCTCGAATAACAACCAATCATTTAA
CTAGCCAAGTAACACCAGTACCTCAAATGAACCCACAAATACCTACCCATCAATATTTTGGGTCGTCAGATCTGCAATTG
ATATCAATGTATCAGCACGACGCCCGTTCTTTGTTAAAAAATGCTATAGAGGTCTCGGAAACAGAACAAAGCATTGACCA
ACGTCGTCTCGGTGGCGGTCAAGGAGCAATTCTTCAGAAAGTTCGCAGGGGAAACTATTGTATATTAAACGAGGGTGGGG
TTGATTACATGGTTCCTAAAAATAACATCAAGATTAACGAGCATAGCTTGGAAACAGTTAAAAATTTATTTGAATGTCAG
GGATATAGGTCTGGATACTCCGGGTTTCAACTGATAAAACCAGCGAGAGTGTCTGCTATTTCCAGAGGTGAAACTTGGCA
GCTTGTAGAACTTGGAGTACTGCAATTTTATTAA

Upstream 100 bases:

>100_bases
CTGCTAAAGTTTCTTCTATTGGAGAAGAAAAGTGGCAACTGTCCGAGCCAGGGAAACTGGAATTTATTGGTTAATTTATT
GAACTAAGAGGTTAGTTATC

Downstream 100 bases:

>100_bases
TGGGCAATGGAACCTTTTGGGGAAGTCAATTCTCAGTTAGATAATTGCGCAGTGAAAAGGATACGATAGTTTATTAGTTC
GTTTATTAGACTTCTCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MWKSIYSWKSTYSLLLSLVLMSGSLVACVQTDPNTILTSPSITSSPLNPDQGNLDQENLKNSFDDIQKTNDEFQTLLDDF
IKDIAAVREGSKNRESVNSSKVNEKLIQLEEKVNTYKNQISQIRNQENLEQNFNSINQNISNIKEITEKLKGGLGKDKIG
EVQLNLQIITNPEVSYFGRLGPDTQSKINESLTENSKQLKAKIIDLGQVTGLPSSVTLDKDDDKELARKIADLEARNNEL
AAIAKKNEEEIKNLNSEKQEIYNQLNQFQSRLKLETFVVIIVLVIAVFLSGLCVYIWQDWRRIKLLLKRYNKAYTNTKQP
NNGVNQTGDLDTQELVYEVDDKVEDAYDKLEKMSKIWENEAKKIQSQIYYLQQNQQVKTPGNNVDNRKLIVQVVNEKIGE
IYRQLQQEIDQRWDIESRNLQNQINQLQQNQKLRTSDNVAGVHRESRITTNHLTSQVTPVPQMNPQIPTHQYFGSSDLQL
ISMYQHDARSLLKNAIEVSETEQSIDQRRLGGGQGAILQKVRRGNYCILNEGGVDYMVPKNNIKINEHSLETVKNLFECQ
GYRSGYSGFQLIKPARVSAISRGETWQLVELGVLQFY

Sequences:

>Translated_597_residues
MWKSIYSWKSTYSLLLSLVLMSGSLVACVQTDPNTILTSPSITSSPLNPDQGNLDQENLKNSFDDIQKTNDEFQTLLDDF
IKDIAAVREGSKNRESVNSSKVNEKLIQLEEKVNTYKNQISQIRNQENLEQNFNSINQNISNIKEITEKLKGGLGKDKIG
EVQLNLQIITNPEVSYFGRLGPDTQSKINESLTENSKQLKAKIIDLGQVTGLPSSVTLDKDDDKELARKIADLEARNNEL
AAIAKKNEEEIKNLNSEKQEIYNQLNQFQSRLKLETFVVIIVLVIAVFLSGLCVYIWQDWRRIKLLLKRYNKAYTNTKQP
NNGVNQTGDLDTQELVYEVDDKVEDAYDKLEKMSKIWENEAKKIQSQIYYLQQNQQVKTPGNNVDNRKLIVQVVNEKIGE
IYRQLQQEIDQRWDIESRNLQNQINQLQQNQKLRTSDNVAGVHRESRITTNHLTSQVTPVPQMNPQIPTHQYFGSSDLQL
ISMYQHDARSLLKNAIEVSETEQSIDQRRLGGGQGAILQKVRRGNYCILNEGGVDYMVPKNNIKINEHSLETVKNLFECQ
GYRSGYSGFQLIKPARVSAISRGETWQLVELGVLQFY
>Mature_597_residues
MWKSIYSWKSTYSLLLSLVLMSGSLVACVQTDPNTILTSPSITSSPLNPDQGNLDQENLKNSFDDIQKTNDEFQTLLDDF
IKDIAAVREGSKNRESVNSSKVNEKLIQLEEKVNTYKNQISQIRNQENLEQNFNSINQNISNIKEITEKLKGGLGKDKIG
EVQLNLQIITNPEVSYFGRLGPDTQSKINESLTENSKQLKAKIIDLGQVTGLPSSVTLDKDDDKELARKIADLEARNNEL
AAIAKKNEEEIKNLNSEKQEIYNQLNQFQSRLKLETFVVIIVLVIAVFLSGLCVYIWQDWRRIKLLLKRYNKAYTNTKQP
NNGVNQTGDLDTQELVYEVDDKVEDAYDKLEKMSKIWENEAKKIQSQIYYLQQNQQVKTPGNNVDNRKLIVQVVNEKIGE
IYRQLQQEIDQRWDIESRNLQNQINQLQQNQKLRTSDNVAGVHRESRITTNHLTSQVTPVPQMNPQIPTHQYFGSSDLQL
ISMYQHDARSLLKNAIEVSETEQSIDQRRLGGGQGAILQKVRRGNYCILNEGGVDYMVPKNNIKINEHSLETVKNLFECQ
GYRSGYSGFQLIKPARVSAISRGETWQLVELGVLQFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68281; Mature: 68281

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKSIYSWKSTYSLLLSLVLMSGSLVACVQTDPNTILTSPSITSSPLNPDQGNLDQENLK
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHH
NSFDDIQKTNDEFQTLLDDFIKDIAAVREGSKNRESVNSSKVNEKLIQLEEKVNTYKNQI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQIRNQENLEQNFNSINQNISNIKEITEKLKGGLGKDKIGEVQLNLQIITNPEVSYFGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHCCC
GPDTQSKINESLTENSKQLKAKIIDLGQVTGLPSSVTLDKDDDKELARKIADLEARNNEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
AAIAKKNEEEIKNLNSEKQEIYNQLNQFQSRLKLETFVVIIVLVIAVFLSGLCVYIWQDW
HHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIKLLLKRYNKAYTNTKQPNNGVNQTGDLDTQELVYEVDDKVEDAYDKLEKMSKIWENE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKIQSQIYYLQQNQQVKTPGNNVDNRKLIVQVVNEKIGEIYRQLQQEIDQRWDIESRNL
HHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QNQINQLQQNQKLRTSDNVAGVHRESRITTNHLTSQVTPVPQMNPQIPTHQYFGSSDLQL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHH
ISMYQHDARSLLKNAIEVSETEQSIDQRRLGGGQGAILQKVRRGNYCILNEGGVDYMVPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCEEEEECC
NNIKINEHSLETVKNLFECQGYRSGYSGFQLIKPARVSAISRGETWQLVELGVLQFY
CCCEECHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MWKSIYSWKSTYSLLLSLVLMSGSLVACVQTDPNTILTSPSITSSPLNPDQGNLDQENLK
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHH
NSFDDIQKTNDEFQTLLDDFIKDIAAVREGSKNRESVNSSKVNEKLIQLEEKVNTYKNQI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQIRNQENLEQNFNSINQNISNIKEITEKLKGGLGKDKIGEVQLNLQIITNPEVSYFGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHCCC
GPDTQSKINESLTENSKQLKAKIIDLGQVTGLPSSVTLDKDDDKELARKIADLEARNNEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
AAIAKKNEEEIKNLNSEKQEIYNQLNQFQSRLKLETFVVIIVLVIAVFLSGLCVYIWQDW
HHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRIKLLLKRYNKAYTNTKQPNNGVNQTGDLDTQELVYEVDDKVEDAYDKLEKMSKIWENE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKIQSQIYYLQQNQQVKTPGNNVDNRKLIVQVVNEKIGEIYRQLQQEIDQRWDIESRNL
HHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QNQINQLQQNQKLRTSDNVAGVHRESRITTNHLTSQVTPVPQMNPQIPTHQYFGSSDLQL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHH
ISMYQHDARSLLKNAIEVSETEQSIDQRRLGGGQGAILQKVRRGNYCILNEGGVDYMVPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCEEEEECC
NNIKINEHSLETVKNLFECQGYRSGYSGFQLIKPARVSAISRGETWQLVELGVLQFY
CCCEECHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA