| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474937
Identifier: 113474937
GI number: 113474937
Start: 1824405
End: 1824599
Strand: Reverse
Name: 113474937
Synonym: Tery_1164
Alternate gene names: NA
Gene position: 1824599-1824405 (Counterclockwise)
Preceding gene: 113474938
Following gene: 113474936
Centisome position: 23.54
GC content: 36.41
Gene sequence:
>195_bases ATGATTTTACCAGGTGTAGCGGTTAAAGTTAAAAATCTTGGTGATACTTACTATGGTTTTCAAGGACAAGTTCAACGAGT AAGTGACGGTAAAGCTGCTGTTTTATTTGAAGGCGGAAATTGGGATAAATTAGTAACATTTAAATTATCGGAATTAGAGG TCGTAGATGCAACGGCAGGCCGCAAGAAAAAATAA
Upstream 100 bases:
>100_bases TAGCATAAAAAAATTTATAAATACCTAAATAAATAACTACAATAAAAAAAACTTTCACTTTTGTAAAATTTAGCAAATAT TTTTGATAGGAGTAGAGACA
Downstream 100 bases:
>100_bases GGATATTTAGTAGTTCAAAGCCAGAAGTTAGGAATTATTTCTATCTTGTTTCATTATCAATATAATTTATACTGAATTAA TGACTAATCAATAAGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MILPGVAVKVKNLGDTYYGFQGQVQRVSDGKAAVLFEGGNWDKLVTFKLSELEVVDATAGRKKK
Sequences:
>Translated_64_residues MILPGVAVKVKNLGDTYYGFQGQVQRVSDGKAAVLFEGGNWDKLVTFKLSELEVVDATAGRKKK >Mature_64_residues MILPGVAVKVKNLGDTYYGFQGQVQRVSDGKAAVLFEGGNWDKLVTFKLSELEVVDATAGRKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6972; Mature: 6972
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPGVAVKVKNLGDTYYGFQGQVQRVSDGKAAVLFEGGNWDKLVTFKLSELEVVDATAG CCCCCEEEEEECCCCEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCEEEEECCCC RKKK CCCC >Mature Secondary Structure MILPGVAVKVKNLGDTYYGFQGQVQRVSDGKAAVLFEGGNWDKLVTFKLSELEVVDATAG CCCCCEEEEEECCCCEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCEEEEECCCC RKKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA