Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474932

Identifier: 113474932

GI number: 113474932

Start: 1819038

End: 1820042

Strand: Reverse

Name: 113474932

Synonym: Tery_1159

Alternate gene names: NA

Gene position: 1820042-1819038 (Counterclockwise)

Preceding gene: 113474933

Following gene: 113474931

Centisome position: 23.48

GC content: 32.44

Gene sequence:

>1005_bases
GTGGGAGATATTAAAGCAATAGGGCAAGAATTGCAAAGAATTGAAGTGGCGATCGTTGATACTGCCAAGGAACTTTATAG
TAAATATCAAAGCTATTTACAAGTTTTGGGGCAAGGTATGAGCCAACAGTTAGTTTTTGCAAGTTATTATATATGTACTC
AGGAATATCCAGAAGCATTTCTGAAGTTATCATTTTCTCAGCGACAAAAAATTCAGCAAGAGCTACGAGAAAAATCTAAG
TTGGCAACTCAAGAATTACAAGAATTATTGAATAAATATCCAGAGAATCAAAAAAATTCGGATGATGCCTCTACCGCAGA
ATTAATGATAAGTCTTCTTTATCAAGAAGAGAAAGAAAAAAAAGAAGTGGTACTCAAAATAAAAAAACAAGAAGAAGCTA
TAGAGCTTGATTCTTCTGAGTTATTTATGACTGAAATATCCTCCCAACTTACAACAGATTCTCAGGATCAAGAAGTAGGA
AATGAAGTCAAAGAAAAAACTGATGAAACTGAAGTCGAAAAAAACAAAATCTCCACAGAAAATATTATTGATAAATTGCA
TAATATTGACACATTGATACATTGGCAAGAAAATATAGAAAAGCAAATACTTGAAATCCTCAAAAAACTTTCTTATCAGA
CAAACTGTATACTTTATGAAGTAGAAATACTGGAAAAAAAAATACCACAAAAACTTTTAGAAGCTGCGACAAAAATGGAA
TCAGGGAGTAATACTGCAAGTGGGCAGCCTAATATATTAAACTTGTTAATAGAAGCAGAAGATTCGGAAGAAGATGATGA
TACTAAAGTTACTCGAATTATAGCAATAAATCTACGGTTATCTGAAATAGAATTTACTGATATTAATGTTGCAGGTTGGC
GCAATAAAATTCGTAATATTTTAGGAAAGCTTAGTCAACTGCAACGAGAATATAGTAAAAAGCAACGAGAACTAGCTGTA
ATAGAAGCTGAGTCAGCATGGCGGTCTAGTTGGTATGAAGATTGA

Upstream 100 bases:

>100_bases
AATTTCATAAAAACAATTAAAAATTAAAAATAGATAATTATGTTTATTTTTAATTTTTAATCGTTGATGTATAAATATAA
TTTGGGTATTGTGGGAAACA

Downstream 100 bases:

>100_bases
AGAAGGAAATAGGGATTTGGGAGCGGTAAAAACATTATTTCATAAGAAATTTACAGTAAAATAGATAAAATAATTAATTC
ATATCAAATAAAAAAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGDIKAIGQELQRIEVAIVDTAKELYSKYQSYLQVLGQGMSQQLVFASYYICTQEYPEAFLKLSFSQRQKIQQELREKSK
LATQELQELLNKYPENQKNSDDASTAELMISLLYQEEKEKKEVVLKIKKQEEAIELDSSELFMTEISSQLTTDSQDQEVG
NEVKEKTDETEVEKNKISTENIIDKLHNIDTLIHWQENIEKQILEILKKLSYQTNCILYEVEILEKKIPQKLLEAATKME
SGSNTASGQPNILNLLIEAEDSEEDDDTKVTRIIAINLRLSEIEFTDINVAGWRNKIRNILGKLSQLQREYSKKQRELAV
IEAESAWRSSWYED

Sequences:

>Translated_334_residues
MGDIKAIGQELQRIEVAIVDTAKELYSKYQSYLQVLGQGMSQQLVFASYYICTQEYPEAFLKLSFSQRQKIQQELREKSK
LATQELQELLNKYPENQKNSDDASTAELMISLLYQEEKEKKEVVLKIKKQEEAIELDSSELFMTEISSQLTTDSQDQEVG
NEVKEKTDETEVEKNKISTENIIDKLHNIDTLIHWQENIEKQILEILKKLSYQTNCILYEVEILEKKIPQKLLEAATKME
SGSNTASGQPNILNLLIEAEDSEEDDDTKVTRIIAINLRLSEIEFTDINVAGWRNKIRNILGKLSQLQREYSKKQRELAV
IEAESAWRSSWYED
>Mature_333_residues
GDIKAIGQELQRIEVAIVDTAKELYSKYQSYLQVLGQGMSQQLVFASYYICTQEYPEAFLKLSFSQRQKIQQELREKSKL
ATQELQELLNKYPENQKNSDDASTAELMISLLYQEEKEKKEVVLKIKKQEEAIELDSSELFMTEISSQLTTDSQDQEVGN
EVKEKTDETEVEKNKISTENIIDKLHNIDTLIHWQENIEKQILEILKKLSYQTNCILYEVEILEKKIPQKLLEAATKMES
GSNTASGQPNILNLLIEAEDSEEDDDTKVTRIIAINLRLSEIEFTDINVAGWRNKIRNILGKLSQLQREYSKKQRELAVI
EAESAWRSSWYED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38686; Mature: 38555

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIKAIGQELQRIEVAIVDTAKELYSKYQSYLQVLGQGMSQQLVFASYYICTQEYPEAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LKLSFSQRQKIQQELREKSKLATQELQELLNKYPENQKNSDDASTAELMISLLYQEEKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KEVVLKIKKQEEAIELDSSELFMTEISSQLTTDSQDQEVGNEVKEKTDETEVEKNKISTE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
NIIDKLHNIDTLIHWQENIEKQILEILKKLSYQTNCILYEVEILEKKIPQKLLEAATKME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
SGSNTASGQPNILNLLIEAEDSEEDDDTKVTRIIAINLRLSEIEFTDINVAGWRNKIRNI
CCCCCCCCCCCEEEEEEECCCCCCCCCHHEEEEEEEEEEEEEEEEEECCHHHHHHHHHHH
LGKLSQLQREYSKKQRELAVIEAESAWRSSWYED
HHHHHHHHHHHHHHHHHHHEEECHHHHHHCCCCC
>Mature Secondary Structure 
GDIKAIGQELQRIEVAIVDTAKELYSKYQSYLQVLGQGMSQQLVFASYYICTQEYPEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LKLSFSQRQKIQQELREKSKLATQELQELLNKYPENQKNSDDASTAELMISLLYQEEKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KEVVLKIKKQEEAIELDSSELFMTEISSQLTTDSQDQEVGNEVKEKTDETEVEKNKISTE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
NIIDKLHNIDTLIHWQENIEKQILEILKKLSYQTNCILYEVEILEKKIPQKLLEAATKME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
SGSNTASGQPNILNLLIEAEDSEEDDDTKVTRIIAINLRLSEIEFTDINVAGWRNKIRNI
CCCCCCCCCCCEEEEEEECCCCCCCCCHHEEEEEEEEEEEEEEEEEECCHHHHHHHHHHH
LGKLSQLQREYSKKQRELAVIEAESAWRSSWYED
HHHHHHHHHHHHHHHHHHHEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA