Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474922

Identifier: 113474922

GI number: 113474922

Start: 1806617

End: 1806856

Strand: Reverse

Name: 113474922

Synonym: Tery_1148

Alternate gene names: NA

Gene position: 1806856-1806617 (Counterclockwise)

Preceding gene: 113474923

Following gene: 113474921

Centisome position: 23.31

GC content: 29.58

Gene sequence:

>240_bases
ATGAATTCACAAAAACAACTAAAAAATAGCCTGATGGGTGCGAGAGACTGTGCATCCAATTTTTATGCAGAAAACGGTAA
AATAAAAGACATATTTAAAAGTATAATGGTAGTAAATAATATTTTTCAAGCATTTCAAAATTCAGTAGATATTGACAATT
TTCCAGAGTTAGTTAGTGGTAGTTACTATTTACTATCTATCTTATTCAAAAATTTAGGTGTGGTAACAAGGCAGGCTTAG

Upstream 100 bases:

>100_bases
TTACCCACCCTATCCTTGGGTTTAATATTTCTTTTATCAACACTTTATAAATATTATTATGGGTAGTTATTTTTTGAACT
TTTCCAACAGGTCCTAAGAT

Downstream 100 bases:

>100_bases
ATATGAAAATAATGAAAGTGATTGTTATTAGTTTTTTAGCAGTTTTACTACTGAGTGGATGTGTTCAATATGAAGTAGGA
ATAAATTTTCAAAGTCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNSQKQLKNSLMGARDCASNFYAENGKIKDIFKSIMVVNNIFQAFQNSVDIDNFPELVSGSYYLLSILFKNLGVVTRQA

Sequences:

>Translated_79_residues
MNSQKQLKNSLMGARDCASNFYAENGKIKDIFKSIMVVNNIFQAFQNSVDIDNFPELVSGSYYLLSILFKNLGVVTRQA
>Mature_79_residues
MNSQKQLKNSLMGARDCASNFYAENGKIKDIFKSIMVVNNIFQAFQNSVDIDNFPELVSGSYYLLSILFKNLGVVTRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8899; Mature: 8899

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQKQLKNSLMGARDCASNFYAENGKIKDIFKSIMVVNNIFQAFQNSVDIDNFPELVSG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
SYYLLSILFKNLGVVTRQA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSQKQLKNSLMGARDCASNFYAENGKIKDIFKSIMVVNNIFQAFQNSVDIDNFPELVSG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
SYYLLSILFKNLGVVTRQA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA