Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474921

Identifier: 113474921

GI number: 113474921

Start: 1805868

End: 1806614

Strand: Reverse

Name: 113474921

Synonym: Tery_1147

Alternate gene names: NA

Gene position: 1806614-1805868 (Counterclockwise)

Preceding gene: 113474922

Following gene: 113474920

Centisome position: 23.31

GC content: 28.78

Gene sequence:

>747_bases
ATGAAAATAATGAAAGTGATTGTTATTAGTTTTTTAGCAGTTTTACTACTGAGTGGATGTGTTCAATATGAAGTAGGAAT
AAATTTTCAAAGTCAAAGTCACGGTGAGATTGTTCAACATATTAAACTAGCAAATAAGTTACGAAATTTTAGTAGTGAGA
TAGTTTCTGACTGGTTTAAAAGTTTAGAAACTAGAGCTTATCAATTGCAAGGAAAAACTCAAAGAATATCTAAGGAGGAA
GTTGTAGTTACAATACCTTTTTATAATGGTACTGAGTTGGAAGAAAAGTTCAATAGTTTTTTTCAAAATCAGGATTCAGT
AGAATATCAAAATTCTTCTACAGGGATGGCAGCAAATTTACCCAAATTATCATCTCACGTTAATGTGAGCCAGAATAATT
TTTTTGTAGCATTACGGAATAAATTGAGTATGAAATTAGATTTGCGATTATCTCAATCTGATAGTAAAGTTAAAATTAAT
CCAGATGAGTTCTTAGATATGGATTTTAAGTTAATTACACCTTGGGGTTTTAGCAATATCCAATCAAGTGAAAATAATAC
AATTAACTATCAAAATAATCGGGAAATTGTCTGGAAACTTAACCCTGGAGAAATCAATTCATTGGATGTAGTATTTTGGA
TTCCTAGCCCCATAGGAATTGGTGCAATTTTAATCAGTTTATTTATTTGTATAGGTATAGCTTTAAAATATAAAATATTA
CCTACTTTAGGAATAAGTAAAAATTAA

Upstream 100 bases:

>100_bases
CAGTAGATATTGACAATTTTCCAGAGTTAGTTAGTGGTAGTTACTATTTACTATCTATCTTATTCAAAAATTTAGGTGTG
GTAACAAGGCAGGCTTAGAT

Downstream 100 bases:

>100_bases
ATAGTTAGTCCTAAGATAGTCATGATATAAATATATCATAACTGTTAATATTATGATTAGCATAACAAAATATGTTGCCA
ATTTACATCTTTCATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKIMKVIVISFLAVLLLSGCVQYEVGINFQSQSHGEIVQHIKLANKLRNFSSEIVSDWFKSLETRAYQLQGKTQRISKEE
VVVTIPFYNGTELEEKFNSFFQNQDSVEYQNSSTGMAANLPKLSSHVNVSQNNFFVALRNKLSMKLDLRLSQSDSKVKIN
PDEFLDMDFKLITPWGFSNIQSSENNTINYQNNREIVWKLNPGEINSLDVVFWIPSPIGIGAILISLFICIGIALKYKIL
PTLGISKN

Sequences:

>Translated_248_residues
MKIMKVIVISFLAVLLLSGCVQYEVGINFQSQSHGEIVQHIKLANKLRNFSSEIVSDWFKSLETRAYQLQGKTQRISKEE
VVVTIPFYNGTELEEKFNSFFQNQDSVEYQNSSTGMAANLPKLSSHVNVSQNNFFVALRNKLSMKLDLRLSQSDSKVKIN
PDEFLDMDFKLITPWGFSNIQSSENNTINYQNNREIVWKLNPGEINSLDVVFWIPSPIGIGAILISLFICIGIALKYKIL
PTLGISKN
>Mature_248_residues
MKIMKVIVISFLAVLLLSGCVQYEVGINFQSQSHGEIVQHIKLANKLRNFSSEIVSDWFKSLETRAYQLQGKTQRISKEE
VVVTIPFYNGTELEEKFNSFFQNQDSVEYQNSSTGMAANLPKLSSHVNVSQNNFFVALRNKLSMKLDLRLSQSDSKVKIN
PDEFLDMDFKLITPWGFSNIQSSENNTINYQNNREIVWKLNPGEINSLDVVFWIPSPIGIGAILISLFICIGIALKYKIL
PTLGISKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28133; Mature: 28133

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMKVIVISFLAVLLLSGCVQYEVGINFQSQSHGEIVQHIKLANKLRNFSSEIVSDWFK
CHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLETRAYQLQGKTQRISKEEVVVTIPFYNGTELEEKFNSFFQNQDSVEYQNSSTGMAANL
HHHHHHEEECCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCEECC
PKLSSHVNVSQNNFFVALRNKLSMKLDLRLSQSDSKVKINPDEFLDMDFKLITPWGFSNI
CHHHCCEEECCCCEEEEEECCCCEEEEEEECCCCCEEEECHHHHHCCCEEEECCCCCCCC
QSSENNTINYQNNREIVWKLNPGEINSLDVVFWIPSPIGIGAILISLFICIGIALKYKIL
CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEE
PTLGISKN
ECCCCCCC
>Mature Secondary Structure
MKIMKVIVISFLAVLLLSGCVQYEVGINFQSQSHGEIVQHIKLANKLRNFSSEIVSDWFK
CHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLETRAYQLQGKTQRISKEEVVVTIPFYNGTELEEKFNSFFQNQDSVEYQNSSTGMAANL
HHHHHHEEECCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCEECC
PKLSSHVNVSQNNFFVALRNKLSMKLDLRLSQSDSKVKINPDEFLDMDFKLITPWGFSNI
CHHHCCEEECCCCEEEEEECCCCEEEEEEECCCCCEEEECHHHHHCCCEEEECCCCCCCC
QSSENNTINYQNNREIVWKLNPGEINSLDVVFWIPSPIGIGAILISLFICIGIALKYKIL
CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEE
PTLGISKN
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA