| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474920
Identifier: 113474920
GI number: 113474920
Start: 1805346
End: 1805720
Strand: Reverse
Name: 113474920
Synonym: Tery_1146
Alternate gene names: NA
Gene position: 1805720-1805346 (Counterclockwise)
Preceding gene: 113474921
Following gene: 113474919
Centisome position: 23.3
GC content: 32.53
Gene sequence:
>375_bases ATGAAACAGATAAACTTTTTGCTGATTTTTTTAGTTTGTTTAGCATTAGTTATATTCACATTACAAAATACCCAACTAAC TACTGTTAAGCTTATTGAAGGTATTGAGTTAGAAGCTCCATTATCTGTAGAACTTTTGATTGCCATAGGATTAGGAGCAG TTCTGGCATGGCTATTCAATTTATGGTCAAGAATACAATATACTATAGAAAGTTTTAGACAGATGCGAGAAATTAGTAGC AGAAATAAGCGTATTCAAGAATTACAAGAAGATGTAGAAAGGTATGAAGAGGAACTCAAACAAAGAGCTAGTTTGCCTGT AGCAGAAACTTTGTCTGATCTAGTAAAATCTACTGAAGCAGAAGCTCCTAAATAA
Upstream 100 bases:
>100_bases ATATTATGATTAGCATAACAAAATATGTTGCCAATTTACATCTTTCATATATTACCTAAGTTATTATTTACTATTGCAAG CATAAGTTGAGATAAAAACA
Downstream 100 bases:
>100_bases AAGTATAATTAGTTTAGTTATGACTTTTGATTTCATTAGTTACTTGTATTTGTATTATACTATCTTTGACTATCCTTAAT ATTTTCACTTAAAATAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK
Sequences:
>Translated_124_residues MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK >Mature_124_residues MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14250; Mature: 14250
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFN CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LWSRIQYTIESFRQMREISSRNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EAPK CCCC >Mature Secondary Structure MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFN CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LWSRIQYTIESFRQMREISSRNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EAPK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA