Click here to switch to the map view.

The map label for this gene is 113474919

Identifier: 113474919

GI number: 113474919

Start: 1804103

End: 1804957

Strand: Reverse

Name: 113474919

Synonym: Tery_1145

Alternate gene names: NA

Gene position: 1804957-1804103 (Counterclockwise)

Preceding gene: 113474920

Following gene: 113474917

Centisome position: 23.29

GC content: 35.09

Gene sequence:

>855_bases
ATGATAATTGGAGTCCCCCAAGTTTCAGAAACTCTTTCAGAAGGAATAGCCCTATTAACAAACCTAGCGGAAAAAGGAGA
AATTAATCCTTGGGATGTCCAAGTAATTGAAGTAATTGATCGCTACTTAAGTAAACTTACTCCTGAATCAAATATTTCTG
GAAGTGACGATTTTGATAACTTATATCAGTCAGGCCAAGCATTTTTGTACGCATCTATATTAGTATGGCTCAAAGCAGAT
CACCTGGCTAATTCAGAATCATCTGAAAATAATTCGGAAATATCTGAAATAGTACAAATTCCAGAAGCAGAAAATTTTGA
AACACCAAAAATCACACCAAAACTTGAGCAACAATTGCGTCGTCGCGCTGTAGCTCCTTCCCCTAGAAAACGTAGAGTTA
CCCTTCAAGAATTAATTGAGCAGTTACAGCTTATTGGAGCTGCTATAGAAAATAGAAAAGCACTTCCTCGTACTCGCAAA
ACTACTTCAAAAGCACGAGCACAAACGGCAAAAGTAATTGCAGAATTAGCTCACCAAGAAAATTTAGTTGAAACAGCAAA
AGATCTAGAAGAGTTTCTTCTGGAAAAATGGCCACAGATAAGTGAAGGTTATTTAGAATTTGAAAATCTTTTAGAATTGT
GGTCTTTAAGATTAGATTTAAAAGCTGAAAAACAACAAAATGAACAGATAAATGTCCAAGTAAAGTCTGATCGAGTAGGT
GCATTTTGGGCATTACTCCTACTGTCTGCTCAGTCTAAAATAGAGTTATCTCAAGAAGAATTTTACCAAGAAATCAAAAT
CCATACTATTTCATCACATTCGCAAGAGCAAAAGGTTTTAGATGATAAGATTTAA

Upstream 100 bases:

>100_bases
ATGAAAACATAGATATTAAGAGAGTAGATATTTATCTAGTATAGTCTATGTTTTTAAGCCTGATCAAGCAACAGTAAAGT
AGAGAAAAAAAACTACGGCT

Downstream 100 bases:

>100_bases
TCCCTTAAAGACAATGGTATAGTACTATAGTGAATGGATAACCAAAATTATTTACCTCTTCTAATTAAGACTTACTGCTA
GGAGTCTTATGGGTGATAAT

Product: condensin subunit ScpA

Products: NA

Alternate protein names: Chromosome Segregation And Condensation Protein ScpA; Condensin Subunit ScpA; ScpA/B Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIIGVPQVSETLSEGIALLTNLAEKGEINPWDVQVIEVIDRYLSKLTPESNISGSDDFDNLYQSGQAFLYASILVWLKAD
HLANSESSENNSEISEIVQIPEAENFETPKITPKLEQQLRRRAVAPSPRKRRVTLQELIEQLQLIGAAIENRKALPRTRK
TTSKARAQTAKVIAELAHQENLVETAKDLEEFLLEKWPQISEGYLEFENLLELWSLRLDLKAEKQQNEQINVQVKSDRVG
AFWALLLLSAQSKIELSQEEFYQEIKIHTISSHSQEQKVLDDKI

Sequences:

>Translated_284_residues
MIIGVPQVSETLSEGIALLTNLAEKGEINPWDVQVIEVIDRYLSKLTPESNISGSDDFDNLYQSGQAFLYASILVWLKAD
HLANSESSENNSEISEIVQIPEAENFETPKITPKLEQQLRRRAVAPSPRKRRVTLQELIEQLQLIGAAIENRKALPRTRK
TTSKARAQTAKVIAELAHQENLVETAKDLEEFLLEKWPQISEGYLEFENLLELWSLRLDLKAEKQQNEQINVQVKSDRVG
AFWALLLLSAQSKIELSQEEFYQEIKIHTISSHSQEQKVLDDKI
>Mature_284_residues
MIIGVPQVSETLSEGIALLTNLAEKGEINPWDVQVIEVIDRYLSKLTPESNISGSDDFDNLYQSGQAFLYASILVWLKAD
HLANSESSENNSEISEIVQIPEAENFETPKITPKLEQQLRRRAVAPSPRKRRVTLQELIEQLQLIGAAIENRKALPRTRK
TTSKARAQTAKVIAELAHQENLVETAKDLEEFLLEKWPQISEGYLEFENLLELWSLRLDLKAEKQQNEQINVQVKSDRVG
AFWALLLLSAQSKIELSQEEFYQEIKIHTISSHSQEQKVLDDKI

Specific function: Unknown

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32357; Mature: 32357

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGVPQVSETLSEGIALLTNLAEKGEINPWDVQVIEVIDRYLSKLTPESNISGSDDFDN
CEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LYQSGQAFLYASILVWLKADHLANSESSENNSEISEIVQIPEAENFETPKITPKLEQQLR
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RRAVAPSPRKRRVTLQELIEQLQLIGAAIENRKALPRTRKTTSKARAQTAKVIAELAHQE
HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NLVETAKDLEEFLLEKWPQISEGYLEFENLLELWSLRLDLKAEKQQNEQINVQVKSDRVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCHH
AFWALLLLSAQSKIELSQEEFYQEIKIHTISSHSQEQKVLDDKI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MIIGVPQVSETLSEGIALLTNLAEKGEINPWDVQVIEVIDRYLSKLTPESNISGSDDFDN
CEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LYQSGQAFLYASILVWLKADHLANSESSENNSEISEIVQIPEAENFETPKITPKLEQQLR
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RRAVAPSPRKRRVTLQELIEQLQLIGAAIENRKALPRTRKTTSKARAQTAKVIAELAHQE
HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NLVETAKDLEEFLLEKWPQISEGYLEFENLLELWSLRLDLKAEKQQNEQINVQVKSDRVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCHH
AFWALLLLSAQSKIELSQEEFYQEIKIHTISSHSQEQKVLDDKI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA