Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474920

Identifier: 113474920

GI number: 113474920

Start: 1805346

End: 1805720

Strand: Reverse

Name: 113474920

Synonym: Tery_1146

Alternate gene names: NA

Gene position: 1805720-1805346 (Counterclockwise)

Preceding gene: 113474921

Following gene: 113474919

Centisome position: 23.3

GC content: 32.53

Gene sequence:

>375_bases
ATGAAACAGATAAACTTTTTGCTGATTTTTTTAGTTTGTTTAGCATTAGTTATATTCACATTACAAAATACCCAACTAAC
TACTGTTAAGCTTATTGAAGGTATTGAGTTAGAAGCTCCATTATCTGTAGAACTTTTGATTGCCATAGGATTAGGAGCAG
TTCTGGCATGGCTATTCAATTTATGGTCAAGAATACAATATACTATAGAAAGTTTTAGACAGATGCGAGAAATTAGTAGC
AGAAATAAGCGTATTCAAGAATTACAAGAAGATGTAGAAAGGTATGAAGAGGAACTCAAACAAAGAGCTAGTTTGCCTGT
AGCAGAAACTTTGTCTGATCTAGTAAAATCTACTGAAGCAGAAGCTCCTAAATAA

Upstream 100 bases:

>100_bases
ATATTATGATTAGCATAACAAAATATGTTGCCAATTTACATCTTTCATATATTACCTAAGTTATTATTTACTATTGCAAG
CATAAGTTGAGATAAAAACA

Downstream 100 bases:

>100_bases
AAGTATAATTAGTTTAGTTATGACTTTTGATTTCATTAGTTACTTGTATTTGTATTATACTATCTTTGACTATCCTTAAT
ATTTTCACTTAAAATAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS
RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK

Sequences:

>Translated_124_residues
MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS
RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK
>Mature_124_residues
MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFNLWSRIQYTIESFRQMREISS
RNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEAEAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14250; Mature: 14250

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LWSRIQYTIESFRQMREISSRNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
EAPK
CCCC
>Mature Secondary Structure
MKQINFLLIFLVCLALVIFTLQNTQLTTVKLIEGIELEAPLSVELLIAIGLGAVLAWLFN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LWSRIQYTIESFRQMREISSRNKRIQELQEDVERYEEELKQRASLPVAETLSDLVKSTEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
EAPK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA