| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mpg1 [H]
Identifier: 113474917
GI number: 113474917
Start: 1801211
End: 1802377
Strand: Reverse
Name: mpg1 [H]
Synonym: Tery_1143
Alternate gene names: 113474917
Gene position: 1802377-1801211 (Counterclockwise)
Preceding gene: 113474919
Following gene: 113474915
Centisome position: 23.26
GC content: 39.59
Gene sequence:
>1167_bases ATGAAAGCCATGATTCTGGCTGCCGGTAAAGGAACTCGTATTCGTCCAATTACTTATCGCATTCCTAAACCGATGATTCC TATTCTGCAAAAACCAGTAATGGAATTCCTTGTAGAGTTGCTTCGTAAACATGGTTTTGACCAAATTATGGTTAACGTTA GTCATTTAGCAAAAGAAATAGAGAACTATTTTCGCGACGGGCAAAGATTTGGGGTCAACATTGCTTATTCTTTTGAGGGG CGAATTGAGGATGGAAACTTGATTGGGGAGGCACTAGGTTCTGCTGGTGGTATGAGGAGAATTCAAGACTTTTATCCTTA CTTTGATGATACTTTTATAGTTCTTTGTGGTGACGCTTTGATAGATTTGGATTTGACTAAAGCACTCCAGCGGCACAAAG AAAAAGGAGCTATGGCTACTGTAATTATGAAGTCTATTCCTCGGGAACAGGTTTCTAGCTATGGTGTTGTAGTCACAGAT GAAACAGGACGAATTCAGTCTTTTCAGGAGAAGCCAAAAGTTGAAGAAGCTCTTAGTACCAATATTAATACTGGTATTTA TATTTTTGAACCAGAGGTGCTTGATTGTATTCCATCTGGTGTGGAATTTGATATTGGTAGTCAGTTATTCCCTAAGTTGG TAGAGATAGGGGCACCTTTTTATGGTGTAGCAATGGATTTTGAATGGGTGGATATTGGTAAGGTGCCGGACTACTGGCAA GCAATTAGAGATGTGCTCATAGGAAAAGTGAAAAATGTTTCTATTCCTGGAAAGGAAGTATCTCCAGGAATTTATACTGG TTTGAATGTAGCCGTTAACTGGGATAAGATAGATATTAAGAGACCTGTTTATATTGGGGGTATGACCAGGATTGAAGATG GAGCCAAAATTGTTGGGCCAAGTATGATTGGTCCTAATTGCTGGATTTGCAGTGGTGCAACTGTTGATAGTAGTGTTATT TTTGAGTATTCTCGTTTAGGTCCAGGAGTTCGCTTAGTTGATAAGTTGGTTTTTGGTCGTTATTGTGTGGATAAGACTGG ATCATCTATTGATGTTCAAGCGGCTTCCCTTGATTGGCTAATTACTGATACTCGTCATCCTTTTCCTTCTCCTCCTCCTG CAGAACATGAAACAATTAAGGATATTTTGCAGGAAAATGGGGGTTAG
Upstream 100 bases:
>100_bases TCTACCTGTTGAAGTAAGGTTTTAATAGAATAAGTATGAGCTTAGAACAGAATAATAAGTATTTTAGTCTTTTTGGCATT TTTAAGGTGGAGGAAATAAA
Downstream 100 bases:
>100_bases TTTTTGCTAGTCCTGCTCCCTTAATAATAGATGTGGATGAACAAGGGCTAAGAAGGTAGCAAGGAGTATAGCATTACAAC ATCGGATTGGAAATTAATTA
Product: nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKAMILAAGKGTRIRPITYRIPKPMIPILQKPVMEFLVELLRKHGFDQIMVNVSHLAKEIENYFRDGQRFGVNIAYSFEG RIEDGNLIGEALGSAGGMRRIQDFYPYFDDTFIVLCGDALIDLDLTKALQRHKEKGAMATVIMKSIPREQVSSYGVVVTD ETGRIQSFQEKPKVEEALSTNINTGIYIFEPEVLDCIPSGVEFDIGSQLFPKLVEIGAPFYGVAMDFEWVDIGKVPDYWQ AIRDVLIGKVKNVSIPGKEVSPGIYTGLNVAVNWDKIDIKRPVYIGGMTRIEDGAKIVGPSMIGPNCWICSGATVDSSVI FEYSRLGPGVRLVDKLVFGRYCVDKTGSSIDVQAASLDWLITDTRHPFPSPPPAEHETIKDILQENGG
Sequences:
>Translated_388_residues MKAMILAAGKGTRIRPITYRIPKPMIPILQKPVMEFLVELLRKHGFDQIMVNVSHLAKEIENYFRDGQRFGVNIAYSFEG RIEDGNLIGEALGSAGGMRRIQDFYPYFDDTFIVLCGDALIDLDLTKALQRHKEKGAMATVIMKSIPREQVSSYGVVVTD ETGRIQSFQEKPKVEEALSTNINTGIYIFEPEVLDCIPSGVEFDIGSQLFPKLVEIGAPFYGVAMDFEWVDIGKVPDYWQ AIRDVLIGKVKNVSIPGKEVSPGIYTGLNVAVNWDKIDIKRPVYIGGMTRIEDGAKIVGPSMIGPNCWICSGATVDSSVI FEYSRLGPGVRLVDKLVFGRYCVDKTGSSIDVQAASLDWLITDTRHPFPSPPPAEHETIKDILQENGG >Mature_388_residues MKAMILAAGKGTRIRPITYRIPKPMIPILQKPVMEFLVELLRKHGFDQIMVNVSHLAKEIENYFRDGQRFGVNIAYSFEG RIEDGNLIGEALGSAGGMRRIQDFYPYFDDTFIVLCGDALIDLDLTKALQRHKEKGAMATVIMKSIPREQVSSYGVVVTD ETGRIQSFQEKPKVEEALSTNINTGIYIFEPEVLDCIPSGVEFDIGSQLFPKLVEIGAPFYGVAMDFEWVDIGKVPDYWQ AIRDVLIGKVKNVSIPGKEVSPGIYTGLNVAVNWDKIDIKRPVYIGGMTRIEDGAKIVGPSMIGPNCWICSGATVDSSVI FEYSRLGPGVRLVDKLVFGRYCVDKTGSSIDVQAASLDWLITDTRHPFPSPPPAEHETIKDILQENGG
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=365, Percent_Identity=29.041095890411, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI11761619, Length=365, Percent_Identity=29.041095890411, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI31881779, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI45447090, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1789837, Length=272, Percent_Identity=26.1029411764706, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1788351, Length=197, Percent_Identity=27.9187817258883, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI133931050, Length=355, Percent_Identity=29.5774647887324, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17509979, Length=240, Percent_Identity=28.75, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509981, Length=229, Percent_Identity=27.9475982532751, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320148, Length=332, Percent_Identity=29.5180722891566, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI21355443, Length=326, Percent_Identity=31.2883435582822, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24644084, Length=326, Percent_Identity=31.2883435582822, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24653912, Length=376, Percent_Identity=23.936170212766, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 43024; Mature: 43024
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMILAAGKGTRIRPITYRIPKPMIPILQKPVMEFLVELLRKHGFDQIMVNVSHLAKEI CCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHH ENYFRDGQRFGVNIAYSFEGRIEDGNLIGEALGSAGGMRRIQDFYPYFDDTFIVLCGDAL HHHHHCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCHH IDLDLTKALQRHKEKGAMATVIMKSIPREQVSSYGVVVTDETGRIQSFQEKPKVEEALST HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCEEEECCCCCHHHHHHCCHHHHHHHC NINTGIYIFEPEVLDCIPSGVEFDIGSQLFPKLVEIGAPFYGVAMDFEWVDIGKVPDYWQ CCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHHHH AIRDVLIGKVKNVSIPGKEVSPGIYTGLNVAVNWDKIDIKRPVYIGGMTRIEDGAKIVGP HHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEECCEEECCCCEEECCCEEECCCCEEECC SMIGPNCWICSGATVDSSVIFEYSRLGPGVRLVDKLVFGRYCVDKTGSSIDVQAASLDWL CCCCCCCEEECCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE ITDTRHPFPSPPPAEHETIKDILQENGG EECCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKAMILAAGKGTRIRPITYRIPKPMIPILQKPVMEFLVELLRKHGFDQIMVNVSHLAKEI CCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHH ENYFRDGQRFGVNIAYSFEGRIEDGNLIGEALGSAGGMRRIQDFYPYFDDTFIVLCGDAL HHHHHCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCHH IDLDLTKALQRHKEKGAMATVIMKSIPREQVSSYGVVVTDETGRIQSFQEKPKVEEALST HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCEEEECCCCCHHHHHHCCHHHHHHHC NINTGIYIFEPEVLDCIPSGVEFDIGSQLFPKLVEIGAPFYGVAMDFEWVDIGKVPDYWQ CCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHHHH AIRDVLIGKVKNVSIPGKEVSPGIYTGLNVAVNWDKIDIKRPVYIGGMTRIEDGAKIVGP HHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEECCEEECCCCEEECCCEEECCCCEEECC SMIGPNCWICSGATVDSSVIFEYSRLGPGVRLVDKLVFGRYCVDKTGSSIDVQAASLDWL CCCCCCCEEECCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE ITDTRHPFPSPPPAEHETIKDILQENGG EECCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]