Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is ppk [H]

Identifier: 113474889

GI number: 113474889

Start: 1753871

End: 1756033

Strand: Reverse

Name: ppk [H]

Synonym: Tery_1114

Alternate gene names: 113474889

Gene position: 1756033-1753871 (Counterclockwise)

Preceding gene: 113474890

Following gene: 113474885

Centisome position: 22.66

GC content: 36.52

Gene sequence:

>2163_bases
ATGTCCAAAAACAAAAAGAATACAGTAGAAACTCCTATCGAAAAAAAACTTAGTAATCCACAATACTACTTTAATAGAGA
ATTGAGTTGGTTAGAGTTTAACCGTAGGGTTTTATCTGAAGGTTTAGACCCCCGTACTCCCCTATTAGAACGTTTAAAAT
TTTTAGGAATTTTTAGTTCTAACTTAGATGAATATTTTATGGTTAGGGTAGCAGTTCTTAAAAAACAAATAGAAGCTGAA
GTGCATAAGTTAACTCCAGACGGTCGTACTCCTCAAGAACAACTAGATGAGATTAATCAAATACTATTACCAATGGTTTC
TTTACAACACCAATTCTTTGAGCAAAACTTACGACCAGAGTTAAGAAAAAATGGTATTGATATCCTAAATTATATAGACT
TAGATAGAGAAGAAAAAACATATCTAAGAAACTATTTTGAAGAACACATATTTCCCGTACTTACTCCTCTAGCTATTGAT
GCTAGTCATCCTTTTCCTTATTTATCTAATCTCAGTTTTAACTTAGCAGTAATGCTGAAAAATCCAGATACTCAAGAAGA
TTTATTAGCCAGAATTAAAGTTCCCAAAATATTACCTCGCTTTTTGTGCTTACCAGAAAAATTACAAATAGAACAAAAGG
CTAAAACTCTAAATTGGACAGGAGTTCCTCTCGAACAAGTCATTGCTCACAATTTGGGAGCTCTGTTTCCTGGTATGGAT
ATTCAGGAGTATCACGTATTTCGGATTACTCGTGATGCTGACTTGGCAGTGCAAGAAGATGAGGGAGATGACTTGCTCTT
AGTGATTGAGAAAGAACTCAGAAAACAGCGTATAGGTGGTACCGTAGTTAGAATGGAAATTAATCCAACAATGCCAAGTA
AATTAAAAAAGACATTAATGGACAACTTGGAGTTATCAGAAAAAGACGTTTACACAGTAGATGGATTACTTGATTTAAAA
GATTTAATGTCATTTTTAGGGTTGCCGTTGCCTCATCTTAAAGATCCAACTTGGACATCTACTATGCCACCAAGGTTGCG
ACATTATGGTGATGAGCTCAGAATTCCTGACCTGAATGAGAATAACAAAATTGATTTTTTTGAAGTGATTCGCCAGAAAG
ACTTATTGTTACATCATCCATATCATTCTTTTGCAAGTACGGTACAAGGTTTCATTAGTCAAGCAGCACACGATCCTAAT
GTATTGGCGATTAAGATGACTCTTTATCGGACTTCTGGAAATTCACCTATTGTTAATGCTTTAATTGCTGCAGCTGAAAA
CGATAAACAAGTTGCAGTATTGGTGGAATTGAAGGCAAGATTTGATGAAGAAAATAATATTCAATGGGCGCGGAAGTTAG
AACAATATGGTGTTCATGTGGTTTATGGTTTAGCAGGTCTGAAGACTCATACTAAAATTGTGATGGTGGTCCGTCAGGAA
GAAGGTCATATCCGTCGCTATGTTCATATTGGCACTGGTAACTATAATCCCAAGACTGCTAAAATTTATACTGATTTGGG
TTTGTTGAGTTGTCGACCAGAATTAGGAGCAGATTTGGCAGATTTGTTTAATTTCTTGACGGGATATTCTCGTCAGCAGT
CTTACCGGAAATTGTTGGTGGCACCTGTAAATATGCGCGATCGCTTTATGAAACTGATTCGTCGGGAAATTGAAAATTGC
CAAAATGGAGATACAGGTCGTATAGTTGCCCAGATGAACTCTTTGGTAGATCCTAAAATTATTACTTCTTTGTATAAAGC
GTCCCAAGTAGGGGTGAAAATTGATTTGATTGTCCGTGGTATTTGTTGTTTGCGTCCGGGTTTAAAAGGTATCAGTGATA
ATATTAAGGTGGTGAGTATTATTGGGCGTTATTTAGAACACTCTCGGGTTTTCTACTTCTATAATAAAGGTAAAGAGGAG
GTGTATATTGGTTCTGCTGATTGGATGCCTCGTAATCTCGATCGTCGGATAGAGGCTATTATACCTGTGGAAGACTCTGA
AATCACAAAAGAGTTGCAAGAAATTATGGGCATTCTGTTATCTGACAACCGACAAGCTTGGGATCTACAACCAGATGGTA
AGTATATTCAGCGTCGTTCTACTGAGAATTTTCCTGAACTTGCCTGCCATAAAATTTTGATGGAAACCGTAGCTAATACT
TAG

Upstream 100 bases:

>100_bases
TTATAATTAATTACACAACCAATTCATAGAAAAAAAATATACTTTACAAGTAATAAAGACTAGCTTACAATCAATATAAA
TTTAAATCCATATTATAATT

Downstream 100 bases:

>100_bases
GGTTTAGTCTTCTTTGTCTTTTTCAAGAGTAGGAGATCTACCCCTATAGAGAAATGGGAAAGTAGGGGAGTGGGTAGAGA
TATTAAAGTTGTTGGGAAAT

Product: polyphosphate kinase

Products: NA

Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAE
VHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAID
ASHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD
IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLK
DLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPN
VLAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE
EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENC
QNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEE
VYIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT

Sequences:

>Translated_720_residues
MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAE
VHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAID
ASHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD
IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLK
DLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPN
VLAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE
EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENC
QNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEE
VYIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT
>Mature_719_residues
SKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAEV
HKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDA
SHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMDI
QEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLKD
LMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNV
LAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQEE
GHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENCQ
NGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEV
YIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT

Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]

COG id: COG0855

COG function: function code P; Polyphosphate kinase

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyphosphate kinase family [H]

Homologues:

Organism=Escherichia coli, GI1788847, Length=685, Percent_Identity=35.7664233576642, Blast_Score=412, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003414 [H]

Pfam domain/function: PF02503 PP_kinase [H]

EC number: =2.7.4.1 [H]

Molecular weight: Translated: 82997; Mature: 82866

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00018 EF_HAND_1 ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSS
CCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
NLDEYFMVRVAVLKKQIEAEVHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDASHPFPYLSNLSFNLAVMLK
HHHCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCEEEEEEEC
NPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD
CCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLM
CCCEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
DNLELSEKDVYTVDGLLDLKDLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNE
HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
NNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNVLAIKMTLYRTSGNSPIVNA
CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHH
LIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE
HHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECC
EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLV
CCCEEEEEEEECCCCCCCEEEEEECCCCEECCHHCCCCHHHHHHHHHCCHHHHHHHHHEE
APVNMRDRFMKLIRREIENCQNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRG
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEHHHHHH
ICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEVYIGSADWMPRNLDRRIEAI
HHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCHHCCEEEE
IPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT
ECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSS
CCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
NLDEYFMVRVAVLKKQIEAEVHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDASHPFPYLSNLSFNLAVMLK
HHHCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCEEEEEEEC
NPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD
CCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLM
CCCEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
DNLELSEKDVYTVDGLLDLKDLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNE
HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
NNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNVLAIKMTLYRTSGNSPIVNA
CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHH
LIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE
HHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECC
EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLV
CCCEEEEEEEECCCCCCCEEEEEECCCCEECCHHCCCCHHHHHHHHHCCHHHHHHHHHEE
APVNMRDRFMKLIRREIENCQNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRG
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEHHHHHH
ICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEVYIGSADWMPRNLDRRIEAI
HHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCHHCCEEEE
IPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT
ECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]