Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474885

Identifier: 113474885

GI number: 113474885

Start: 1745214

End: 1745681

Strand: Reverse

Name: 113474885

Synonym: Tery_1109

Alternate gene names: NA

Gene position: 1745681-1745214 (Counterclockwise)

Preceding gene: 113474889

Following gene: 113474884

Centisome position: 22.52

GC content: 36.97

Gene sequence:

>468_bases
ATGCCCTTAATACTCTCCTCTTCCTACTTTCAAAAAATTTTGACTCATGCTGAAATATCTTACCCAAATGAATGCTGTGG
TTTACTATTAGGTCAGAAAAACCAAGAGACAAAAACAGTTATTGAAGTCTGGCCTGCTGAAAATGCCTGGCAAACAGAAG
CAGATGAATATTGGCCAGAACAAACAGAATTTACAGAAGAAAAAAGATATGCCATATCCCCAGAACTGATGCTAAAAACA
ATGAAGTCCGCAAGAGAACGCCACTTATCTATTATTGGCATCTATCATTCCCACCCAAACCATGTAGCTATCCCCTCAGA
ATTTGACCGTACCTATGCTTGGCCAGAATATTCCTATGTTATAATCTCAGTGGAAAAAGGCCAAGCTATTGACTTTCTCT
GTTGGTCTCTTGATGATAATCACCAGTTTCAACCAGAAAAAATTATTAAAATAAAAGATAAGCAATAA

Upstream 100 bases:

>100_bases
AAATACCTTAAGAAGAAGAAAAAAACCATAAAATCTTATTCAATAGATTGTACACAAAAATTATTTAACTCACATTCGGC
TTTCCTACCTCTCAAAACAG

Downstream 100 bases:

>100_bases
GCTATATAGCAGGTTTAATGTAGATAATTTTAGGAGGTAGTTGCTAACTTTAATATTCCTAGCAATTTATCGCAATAGCT
CAAAAAAATTTGATAAAATT

Product: Mov34/MPN/PAD-1 protein

Products: NA

Alternate protein names: Metal-Dependent Protease Of PAD1/JA B1 Superfamily; Mov34/MPN/PAD-1 Family

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPLILSSSYFQKILTHAEISYPNECCGLLLGQKNQETKTVIEVWPAENAWQTEADEYWPEQTEFTEEKRYAISPELMLKT
MKSARERHLSIIGIYHSHPNHVAIPSEFDRTYAWPEYSYVIISVEKGQAIDFLCWSLDDNHQFQPEKIIKIKDKQ

Sequences:

>Translated_155_residues
MPLILSSSYFQKILTHAEISYPNECCGLLLGQKNQETKTVIEVWPAENAWQTEADEYWPEQTEFTEEKRYAISPELMLKT
MKSARERHLSIIGIYHSHPNHVAIPSEFDRTYAWPEYSYVIISVEKGQAIDFLCWSLDDNHQFQPEKIIKIKDKQ
>Mature_154_residues
PLILSSSYFQKILTHAEISYPNECCGLLLGQKNQETKTVIEVWPAENAWQTEADEYWPEQTEFTEEKRYAISPELMLKTM
KSARERHLSIIGIYHSHPNHVAIPSEFDRTYAWPEYSYVIISVEKGQAIDFLCWSLDDNHQFQPEKIIKIKDKQ

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18194; Mature: 18063

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLILSSSYFQKILTHAEISYPNECCGLLLGQKNQETKTVIEVWPAENAWQTEADEYWPE
CCEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHCCCC
QTEFTEEKRYAISPELMLKTMKSARERHLSIIGIYHSHPNHVAIPSEFDRTYAWPEYSYV
CCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCEEE
IISVEKGQAIDFLCWSLDDNHQFQPEKIIKIKDKQ
EEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
PLILSSSYFQKILTHAEISYPNECCGLLLGQKNQETKTVIEVWPAENAWQTEADEYWPE
CEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHCCCC
QTEFTEEKRYAISPELMLKTMKSARERHLSIIGIYHSHPNHVAIPSEFDRTYAWPEYSYV
CCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEEECCCCEEECCCCCCCCCCCCCCEEE
IISVEKGQAIDFLCWSLDDNHQFQPEKIIKIKDKQ
EEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA