Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474880

Identifier: 113474880

GI number: 113474880

Start: 1736814

End: 1737599

Strand: Reverse

Name: 113474880

Synonym: Tery_1103

Alternate gene names: NA

Gene position: 1737599-1736814 (Counterclockwise)

Preceding gene: 113474881

Following gene: 113474879

Centisome position: 22.42

GC content: 38.17

Gene sequence:

>786_bases
ATGATGCCAGAAGAAAGTTACAAAAATAATGAGGTTGCTTTTCTGGGAGAAGTAGCTGATAAGTTGAGTCTTAAAGATAA
CACTAGGCTTGTATTTATTGAACGGTTTAAAATAAATAATGATGATTTGAATAATGCAGCTTTGGCTGATGTTTTATTAA
CAAATTTACGACATAATAATACTATGCGGGATGCTTTGAGGAGAATATTTAAAAAACTGGAGGTTGAAGGTTGTCATTTT
AATGACGCGACAAGAGATAAAGTTAATATTGCTAGACAGTGGCTCCGTGAAGTTCTTTATCCCTGGTATCAATTAAAAAA
TATGGCTACTTCAACTAATAAAATGGGTCCTGTTCTTCAAGGGATGAGCACAATGGATATGTATACGGTTGATCCTCATT
ATCCTAAGACTGTGCCTCTAGATAGTGAAATTAAGTTTGAGGTACGGTTGGAACGTCGGGGATATTTAACTCTGTTAGAA
AGGGGTACTTCTGGTGAGTTTTATTGTTTGTCTCCTTCATTTTTGGGAGCTTTGCCTATTTTTGATGCGGGTGTGGTGTC
TTTACCTATGGAGGGGGCGCCAGTTGATTATTTTAGGTTGGATGGTAAACCAGGGGTTGAGGAGATCATAGCGGGGATCA
GTCAGGAACGTCCAAGGTTAAGTTGGTTACCACAAGGAGACCAACCACCTTTGTTGTTAGAGGGAAAGCATTTGCAGGAA
TTTTTGACTTATTTTCAGGCTGAGTCAGACTCTACTTTGTGGTATATGTTTTATGATGTGGTTTAG

Upstream 100 bases:

>100_bases
AGAGATAGGTAGAGTTATGTAGAGTCATGTAGTTTTTTTGTAGATTTTTTGATTTTATTGAAGTATCATTATAAATGAAC
CTATAAGAAAGGAATGGTTG

Downstream 100 bases:

>100_bases
GTGTAGTTGGTGTTGGGTTTTAGGTGGTAGGTGGCTGGTGGCTGGTGCCTGGTGGTACGGTTTCATAACTAAGTTTCTAT
AACTAAAGCTTTGTAGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MMPEESYKNNEVAFLGEVADKLSLKDNTRLVFIERFKINNDDLNNAALADVLLTNLRHNNTMRDALRRIFKKLEVEGCHF
NDATRDKVNIARQWLREVLYPWYQLKNMATSTNKMGPVLQGMSTMDMYTVDPHYPKTVPLDSEIKFEVRLERRGYLTLLE
RGTSGEFYCLSPSFLGALPIFDAGVVSLPMEGAPVDYFRLDGKPGVEEIIAGISQERPRLSWLPQGDQPPLLLEGKHLQE
FLTYFQAESDSTLWYMFYDVV

Sequences:

>Translated_261_residues
MMPEESYKNNEVAFLGEVADKLSLKDNTRLVFIERFKINNDDLNNAALADVLLTNLRHNNTMRDALRRIFKKLEVEGCHF
NDATRDKVNIARQWLREVLYPWYQLKNMATSTNKMGPVLQGMSTMDMYTVDPHYPKTVPLDSEIKFEVRLERRGYLTLLE
RGTSGEFYCLSPSFLGALPIFDAGVVSLPMEGAPVDYFRLDGKPGVEEIIAGISQERPRLSWLPQGDQPPLLLEGKHLQE
FLTYFQAESDSTLWYMFYDVV
>Mature_261_residues
MMPEESYKNNEVAFLGEVADKLSLKDNTRLVFIERFKINNDDLNNAALADVLLTNLRHNNTMRDALRRIFKKLEVEGCHF
NDATRDKVNIARQWLREVLYPWYQLKNMATSTNKMGPVLQGMSTMDMYTVDPHYPKTVPLDSEIKFEVRLERRGYLTLLE
RGTSGEFYCLSPSFLGALPIFDAGVVSLPMEGAPVDYFRLDGKPGVEEIIAGISQERPRLSWLPQGDQPPLLLEGKHLQE
FLTYFQAESDSTLWYMFYDVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30057; Mature: 30057

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPEESYKNNEVAFLGEVADKLSLKDNTRLVFIERFKINNDDLNNAALADVLLTNLRHNN
CCCCCCCCCCCEEEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC
TMRDALRRIFKKLEVEGCHFNDATRDKVNIARQWLREVLYPWYQLKNMATSTNKMGPVLQ
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GMSTMDMYTVDPHYPKTVPLDSEIKFEVRLERRGYLTLLERGTSGEFYCLSPSFLGALPI
CCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECHHHHCCCCC
FDAGVVSLPMEGAPVDYFRLDGKPGVEEIIAGISQERPRLSWLPQGDQPPLLLEGKHLQE
CCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHH
FLTYFQAESDSTLWYMFYDVV
HHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MMPEESYKNNEVAFLGEVADKLSLKDNTRLVFIERFKINNDDLNNAALADVLLTNLRHNN
CCCCCCCCCCCEEEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC
TMRDALRRIFKKLEVEGCHFNDATRDKVNIARQWLREVLYPWYQLKNMATSTNKMGPVLQ
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GMSTMDMYTVDPHYPKTVPLDSEIKFEVRLERRGYLTLLERGTSGEFYCLSPSFLGALPI
CCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECHHHHCCCCC
FDAGVVSLPMEGAPVDYFRLDGKPGVEEIIAGISQERPRLSWLPQGDQPPLLLEGKHLQE
CCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHH
FLTYFQAESDSTLWYMFYDVV
HHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA