| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474881
Identifier: 113474881
GI number: 113474881
Start: 1738000
End: 1738806
Strand: Reverse
Name: 113474881
Synonym: Tery_1104
Alternate gene names: NA
Gene position: 1738806-1738000 (Counterclockwise)
Preceding gene: 113474882
Following gene: 113474880
Centisome position: 22.44
GC content: 37.3
Gene sequence:
>807_bases ATGCTAGAGGAAAGTTATAAAAATAATGAGGCTATTTTTCTGAACAAAATAGCTGATAAATTGATGGTTAAAGATAAAAC CAGGCTGGTGTTTACGGAGCGGTTTAAAATAGATAATGATGATTTGAATAATCAAAAACTGGCTGATGTTTTATCAAGTA ATTTATTACAGAATGCTAGCAAAAAAGCAACATCAGATATTATTTTGCGGGACTCTTTGAAAACAATATTTAAAAAACTG GAGACTGAAGGTTGTGATTTTGAGGGAGCAAAAAGAGACAAGGTTAAAATTGCTAAACGGTGGTTGCGTGAAATAATTTA TCCCTGGCATGCATTAAAAGATATGGCGACTTTTACTGATAAAATGGGTCTTGTTATCCAAGGAATTACACAGTTGGATA CGTCTAAAACTGTTTCTCGTTATCCCAGTGTTATACCTCTCAATAGTGAGGTTAAGTTTGAGGTACAGTTGGAACGTTCG GGATATTTAACTCTCTTAAAAAAAGGTGCTTCTGGCGTATTTTATTGTTTGTCTCCTTCGTGTTTGGCAAGTTCACCTAT TTTTGATGGGGGCGTAGCATCGTTACCAATGGAGGGGGCACCAGTTAATCATTTTAAGTTGAATGGTAAAATAGGGGTTG AGGAGATCATAGCAGGGATCAGTCACGAACGTCCAAACTTAGATTGGTTGCCGGCGGCGGACCAACTACCTTTGCTTTTA AAGGGAGAGCACTTACAGGAGTTTTTGATGTATTTTAAGGCTGAGTTAGGCTCTACTTTATGGTACATGCATTATCAGGT GGTTTAG
Upstream 100 bases:
>100_bases CCTATGTAAGTTTATGTAGAATTGTGTATAATTGTTGTGTCAATTTCAATTTTGTAGAAATATAATTATAGACAAAGTTA TCAAGAAGGAAAATTTGATT
Downstream 100 bases:
>100_bases CGCTATACATAAGCTCAAAGTCAACCCCCCCTTGGAGGGCAAGGGGGGAATTCACGGGGTTGAAGCTCGGTTTCAGGGAA GGGTAAGGTACGAGCAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLEESYKNNEAIFLNKIADKLMVKDKTRLVFTERFKIDNDDLNNQKLADVLSSNLLQNASKKATSDIILRDSLKTIFKKL ETEGCDFEGAKRDKVKIAKRWLREIIYPWHALKDMATFTDKMGLVIQGITQLDTSKTVSRYPSVIPLNSEVKFEVQLERS GYLTLLKKGASGVFYCLSPSCLASSPIFDGGVASLPMEGAPVNHFKLNGKIGVEEIIAGISHERPNLDWLPAADQLPLLL KGEHLQEFLMYFKAELGSTLWYMHYQVV
Sequences:
>Translated_268_residues MLEESYKNNEAIFLNKIADKLMVKDKTRLVFTERFKIDNDDLNNQKLADVLSSNLLQNASKKATSDIILRDSLKTIFKKL ETEGCDFEGAKRDKVKIAKRWLREIIYPWHALKDMATFTDKMGLVIQGITQLDTSKTVSRYPSVIPLNSEVKFEVQLERS GYLTLLKKGASGVFYCLSPSCLASSPIFDGGVASLPMEGAPVNHFKLNGKIGVEEIIAGISHERPNLDWLPAADQLPLLL KGEHLQEFLMYFKAELGSTLWYMHYQVV >Mature_268_residues MLEESYKNNEAIFLNKIADKLMVKDKTRLVFTERFKIDNDDLNNQKLADVLSSNLLQNASKKATSDIILRDSLKTIFKKL ETEGCDFEGAKRDKVKIAKRWLREIIYPWHALKDMATFTDKMGLVIQGITQLDTSKTVSRYPSVIPLNSEVKFEVQLERS GYLTLLKKGASGVFYCLSPSCLASSPIFDGGVASLPMEGAPVNHFKLNGKIGVEEIIAGISHERPNLDWLPAADQLPLLL KGEHLQEFLMYFKAELGSTLWYMHYQVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30321; Mature: 30321
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEESYKNNEAIFLNKIADKLMVKDKTRLVFTERFKIDNDDLNNQKLADVLSSNLLQNAS CCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KKATSDIILRDSLKTIFKKLETEGCDFEGAKRDKVKIAKRWLREIIYPWHALKDMATFTD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGLVIQGITQLDTSKTVSRYPSVIPLNSEVKFEVQLERSGYLTLLKKGASGVFYCLSPS HHHHHHHHHHHHCCHHHHHHCCCEEECCCCEEEEEEECCCCCEEEEECCCCEEEEEECCH CLASSPIFDGGVASLPMEGAPVNHFKLNGKIGVEEIIAGISHERPNLDWLPAADQLPLLL HHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEE KGEHLQEFLMYFKAELGSTLWYMHYQVV ECHHHHHHHHHHHHHHCCEEEEEEEEEC >Mature Secondary Structure MLEESYKNNEAIFLNKIADKLMVKDKTRLVFTERFKIDNDDLNNQKLADVLSSNLLQNAS CCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KKATSDIILRDSLKTIFKKLETEGCDFEGAKRDKVKIAKRWLREIIYPWHALKDMATFTD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGLVIQGITQLDTSKTVSRYPSVIPLNSEVKFEVQLERSGYLTLLKKGASGVFYCLSPS HHHHHHHHHHHHCCHHHHHHCCCEEECCCCEEEEEEECCCCCEEEEECCCCEEEEEECCH CLASSPIFDGGVASLPMEGAPVNHFKLNGKIGVEEIIAGISHERPNLDWLPAADQLPLLL HHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEE KGEHLQEFLMYFKAELGSTLWYMHYQVV ECHHHHHHHHHHHHHHCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA