| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is glmM
Identifier: 113474872
GI number: 113474872
Start: 1721596
End: 1723065
Strand: Direct
Name: glmM
Synonym: Tery_1095
Alternate gene names: 113474872
Gene position: 1721596-1723065 (Clockwise)
Preceding gene: 113474867
Following gene: 113474873
Centisome position: 22.21
GC content: 42.11
Gene sequence:
>1470_bases ATGGTTACAACACCATCATTCAAGCCAACTTACGAACAAAACACTTTTAAATTATCACCTACAGCAACAACAACAACGTT GCCTTGGAATAATACCTCACTGCCCACAACACCCCTATTTGGGACAGATGGCATTCGGGGCAAAGCAGGAGAATTACTCA CCGCCCCTATGGCCCTACAAATAGGTTTTTGGGCAGGACAAGTATTGCCCCAATATTGTCAAAATCCTGGCCCGATAATT ATGGGTCAAGATACTAGAAACTCAGGTAATATGCTGGCAATGGCTCTCTCAGCAGGTTTGACAGCAGCAGGGTTAGAAGT TTGGAATTTAGGTTTATGCCCTACCCCTTGTGTTGCCTATATCACAAGTATTTCAGAAGCAATAGGCGGAGTAATGATTT CCGCTAGTCATAACCCACCCGAAGATAATGGAATAAAATTTTTTGGTTCCGATGGTACAAAACTCTCTTCAGAATTACAG CAAAAGATAGAATCTGGAATTCGAGGTACCGCAAATTTTCCTACCAATCATAGTAACTGGGGACAGCATTACCATAGACC AGAATTAGTCAAGGAGTACCAAGCATCTCTACATTCTCCATTAACACCAGGATCTCTCCAGGGAATGAAAATAGTTCTAG ACTTAGCTTGGGGAGCAGCAGTTCATACTGCCCCAGAAGTTTTTCGAGGAATGGGGGCAGAAATTATTTGTTTGCATGAC CAACCCAATGGCGATCGGATCAACGTTAACTGTGGTTCTACCCATCTGTCTCACCTCCAACAAGCAGTAATAGAACATAA TGCTAATCTAGGGTTTGCCTTTGATGGAGACGCAGACCGAGTATTAGCAATAGATTCTCAAGGTCGTTCTATTGATGGAG ATTATATACTCTATTTCTGGGGTCAAAGCTTAAGTAAAGCAAGGTTACTACCAAACAATTTGATTGTAACTACAGTTATG GCAAACTTAGGTTTTGAACACGCTTGGAACAAACAGGGTGGAAAAATATTACGGACAAAAGTAGGAGACCAATATGTTCA TGCTGAAATGCAGCGCACCGGATCTATGCTAGGCGGAGAACAATCAGGACATGTTCTTTGTCCCCACTATGGCATTACAG GAGATGGTCTAATGACGGCCTTACATTTGGCAACCCTAGTCAAAAATTCTGGAATTTCTCTAGCAGAGTTAGTAGACCAA AGCTTTAAGACCTATCCCCAATTGCTCAGAAATGTTAGAGTTGAAGACCGCGATCGACGGGCCAACTGGAAAAACTGCGA ACCATTAGTCAAAACTATAGAAGAAGCAGAAACAGCCTTAGCAGATTTGGGACGAGTATTAGTCCGAGCCTCTGGTACAG AGCCGGTAATTCGAGTCATGGTAGAAGCTATTAATCTAGAACTAGCAAAATCTTGGACAGAAAATATAGTTTTAGCAGTC CAGCAGCATTTATTACCTACTAAAGACTAA
Upstream 100 bases:
>100_bases GTTATTTATACTTATGCAACCTGACATGATATTAAATCCGGAAATGCTATCCTCTTTGTTGAGAGTAAAAATAACTTAAC CTTGACAAGGAGTTAAAATT
Downstream 100 bases:
>100_bases AACATAGATGATCCTAGACAAGCTACAAAATATCTAGGATCTCAAAAAAATCAGGAGTGTGCAGATAGCAAAAATATTTG CTATTCAAGCCAATGAATAT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MVTTPSFKPTYEQNTFKLSPTATTTTLPWNNTSLPTTPLFGTDGIRGKAGELLTAPMALQIGFWAGQVLPQYCQNPGPII MGQDTRNSGNMLAMALSAGLTAAGLEVWNLGLCPTPCVAYITSISEAIGGVMISASHNPPEDNGIKFFGSDGTKLSSELQ QKIESGIRGTANFPTNHSNWGQHYHRPELVKEYQASLHSPLTPGSLQGMKIVLDLAWGAAVHTAPEVFRGMGAEIICLHD QPNGDRINVNCGSTHLSHLQQAVIEHNANLGFAFDGDADRVLAIDSQGRSIDGDYILYFWGQSLSKARLLPNNLIVTTVM ANLGFEHAWNKQGGKILRTKVGDQYVHAEMQRTGSMLGGEQSGHVLCPHYGITGDGLMTALHLATLVKNSGISLAELVDQ SFKTYPQLLRNVRVEDRDRRANWKNCEPLVKTIEEAETALADLGRVLVRASGTEPVIRVMVEAINLELAKSWTENIVLAV QQHLLPTKD
Sequences:
>Translated_489_residues MVTTPSFKPTYEQNTFKLSPTATTTTLPWNNTSLPTTPLFGTDGIRGKAGELLTAPMALQIGFWAGQVLPQYCQNPGPII MGQDTRNSGNMLAMALSAGLTAAGLEVWNLGLCPTPCVAYITSISEAIGGVMISASHNPPEDNGIKFFGSDGTKLSSELQ QKIESGIRGTANFPTNHSNWGQHYHRPELVKEYQASLHSPLTPGSLQGMKIVLDLAWGAAVHTAPEVFRGMGAEIICLHD QPNGDRINVNCGSTHLSHLQQAVIEHNANLGFAFDGDADRVLAIDSQGRSIDGDYILYFWGQSLSKARLLPNNLIVTTVM ANLGFEHAWNKQGGKILRTKVGDQYVHAEMQRTGSMLGGEQSGHVLCPHYGITGDGLMTALHLATLVKNSGISLAELVDQ SFKTYPQLLRNVRVEDRDRRANWKNCEPLVKTIEEAETALADLGRVLVRASGTEPVIRVMVEAINLELAKSWTENIVLAV QQHLLPTKD >Mature_489_residues MVTTPSFKPTYEQNTFKLSPTATTTTLPWNNTSLPTTPLFGTDGIRGKAGELLTAPMALQIGFWAGQVLPQYCQNPGPII MGQDTRNSGNMLAMALSAGLTAAGLEVWNLGLCPTPCVAYITSISEAIGGVMISASHNPPEDNGIKFFGSDGTKLSSELQ QKIESGIRGTANFPTNHSNWGQHYHRPELVKEYQASLHSPLTPGSLQGMKIVLDLAWGAAVHTAPEVFRGMGAEIICLHD QPNGDRINVNCGSTHLSHLQQAVIEHNANLGFAFDGDADRVLAIDSQGRSIDGDYILYFWGQSLSKARLLPNNLIVTTVM ANLGFEHAWNKQGGKILRTKVGDQYVHAEMQRTGSMLGGEQSGHVLCPHYGITGDGLMTALHLATLVKNSGISLAELVDQ SFKTYPQLLRNVRVEDRDRRANWKNCEPLVKTIEEAETALADLGRVLVRASGTEPVIRVMVEAINLELAKSWTENIVLAV QQHLLPTKD
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=453, Percent_Identity=40.3973509933775, Blast_Score=267, Evalue=9e-73, Organism=Escherichia coli, GI1788361, Length=443, Percent_Identity=27.0880361173815, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_TRIEI (Q116W4)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720933.1 - ProteinModelPortal: Q116W4 - SMR: Q116W4 - STRING: Q116W4 - GeneID: 4242176 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1095 - NMPDR: fig|203124.1.peg.1543 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: CRVYIRP - PhylomeDB: Q116W4 - ProtClustDB: PRK14317 - BioCyc: TERY203124:TERY_1095-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 53095; Mature: 53095
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTPSFKPTYEQNTFKLSPTATTTTLPWNNTSLPTTPLFGTDGIRGKAGELLTAPMALQ CCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHEE IGFWAGQVLPQYCQNPGPIIMGQDTRNSGNMLAMALSAGLTAAGLEVWNLGLCPTPCVAY EHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCCHHCHHHEECCCCCHHHHHH ITSISEAIGGVMISASHNPPEDNGIKFFGSDGTKLSSELQQKIESGIRGTANFPTNHSNW HHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC GQHYHRPELVKEYQASLHSPLTPGSLQGMKIVLDLAWGAAVHTAPEVFRGMGAEIICLHD CHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHCCHHHHHCCCCEEEEEEC QPNGDRINVNCGSTHLSHLQQAVIEHNANLGFAFDGDADRVLAIDSQGRSIDGDYILYFW CCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEE GQSLSKARLLPNNLIVTTVMANLGFEHAWNKQGGKILRTKVGDQYVHAEMQRTGSMLGGE CCCCCCHHCCCCCHHHHHHHHHCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC QSGHVLCPHYGITGDGLMTALHLATLVKNSGISLAELVDQSFKTYPQLLRNVRVEDRDRR CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC ANWKNCEPLVKTIEEAETALADLGRVLVRASGTEPVIRVMVEAINLELAKSWTENIVLAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QQHLLPTKD HHHCCCCCC >Mature Secondary Structure MVTTPSFKPTYEQNTFKLSPTATTTTLPWNNTSLPTTPLFGTDGIRGKAGELLTAPMALQ CCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHEE IGFWAGQVLPQYCQNPGPIIMGQDTRNSGNMLAMALSAGLTAAGLEVWNLGLCPTPCVAY EHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCCHHCHHHEECCCCCHHHHHH ITSISEAIGGVMISASHNPPEDNGIKFFGSDGTKLSSELQQKIESGIRGTANFPTNHSNW HHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC GQHYHRPELVKEYQASLHSPLTPGSLQGMKIVLDLAWGAAVHTAPEVFRGMGAEIICLHD CHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHCCHHHHHCCCCEEEEEEC QPNGDRINVNCGSTHLSHLQQAVIEHNANLGFAFDGDADRVLAIDSQGRSIDGDYILYFW CCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEE GQSLSKARLLPNNLIVTTVMANLGFEHAWNKQGGKILRTKVGDQYVHAEMQRTGSMLGGE CCCCCCHHCCCCCHHHHHHHHHCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC QSGHVLCPHYGITGDGLMTALHLATLVKNSGISLAELVDQSFKTYPQLLRNVRVEDRDRR CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC ANWKNCEPLVKTIEEAETALADLGRVLVRASGTEPVIRVMVEAINLELAKSWTENIVLAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QQHLLPTKD HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA