Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474873

Identifier: 113474873

GI number: 113474873

Start: 1723362

End: 1724966

Strand: Direct

Name: 113474873

Synonym: Tery_1096

Alternate gene names: NA

Gene position: 1723362-1724966 (Clockwise)

Preceding gene: 113474872

Following gene: 113474874

Centisome position: 22.24

GC content: 37.63

Gene sequence:

>1605_bases
ATGCCAAAAAAACAAAAGTCTCAAAAGAAATTAAAAAAGAAAGGCAAACCTGCTACTCCCCAGATTAGCAAAAAGAAATT
AGCTGCTAGGAAGCGCAAACGAGCCAAACAAATTCAGCAATTTATTGGTTCCTTGGCAACTTATGGTGGTCTTGGTGCCA
TCATTGGTCTTGTATTATTTTTTGTTGCAGAACCAAAAATAGGCCTTGCTGGTGGTTTTGGTCTGGCAGTTTTAGCTCTT
TCTTTTAAATATCCAATGTTGGGACTTTGGGGATTTCTAATGTATTTGCCCTTTGCTGGTACTGTTACTTACTGGGTAGG
TGACGGAGGTCCTATATTTCAGCTAGCCAAAGATGGGTTTTATATTCCTGCAATCATTGCTATTAGTTTGTGGTGCAAAA
AGACAGGAAATCCATTCATTATTCCCAAATCAATAAAAAATCCCCTGTATGCTTTATTGGGCTTGTGTCTCATAACTTTA
TTCTTAGTTAATGGTGTACAACACTTTAACCCTCCCCAACCAGGAGATAAGGCAATTCCTATGGGAATATTGGGACTCAA
AGTCATGATCGGCTACTTACCTCTGATCACGGGGGCTTATTATCAACTCAAAAGTAAAAAAGAGTTATTATTTGTTGCCC
GTCTGACACTAATACTAGCTATTATCTGTTGCTTACTAACTATCGTACAATACCAATACCTTTCTTCTGGTAAGTGTAAC
GGTACTAGGGGTCAAACTGGAGACGCACTATTTAAGGCAAGCTTAGAAGCTAAATGTTTGGTAGGAGGTGCTCTAGTATT
TAGTCCTAGTCAAGGCATGATTCGTTTACCAGGTACTTTTGTTGCACCTTGGCAGTGGGGATGGTTCTTGATTTCTAATG
CTGCGTTTACCTTTGCAGTTGCTTTTAGTGACCCTTCTTCCCTCTGGCGAATGGGAGGGTTATTTGGTATGGCAGTAGTT
TTTATTAATGCAGCTATTAGCGGTCAAAGAATTGCTTTAGCTTTAGTTCCCACAACAACAATAATACTCTTAATCTTAAC
AGGTCAGCTAGCTAACTTTAAACGGTTGATACCCATTGGAGCTGGACTAGCTGTTATACTAGGAGGTCTAATAGTATCTA
ATCCCGTAATTGTTCAAGAGCGGATAAATAGTTTTGTTGGTCGCTGGAATGCTTCACCGCCAACTGCTTTTATTTCAGAA
CAATTTGAGCAGTCTAATCATGCACAAAAAGGGTTTTTTGGTATCGGTCTTGGACGGGCTACTAATTCAGCCCGAGTTTT
TGGTAAAACTAAATTAATTGAAACTTATTATCCTAAGTTAATCTATGAAATAGGACCTATAGGCACAATAGCAATGTTAG
TTCTATTAACAAATATTACTGTTAGTACTTTTAAAGCTTATCGCTCAGTTAAAGATAAAAACATGCGCAGTTTAGGTGCA
AGCTATTGGGTTTTTGTTCTCATAATTAGTTATAACACTTATTATTACCCTCTTGATGTAGATCCAGTTGCAGTTTATTA
CTGGTATTTTGCTGGAGTCATTATGAAACTGCCAGAAATTGATAAAATTGAACAGATAAAACTTAAAGAAGCTGAGGAAA
ATTGA

Upstream 100 bases:

>100_bases
TCTAAGCAAGTAAATATTGAAACGGGTTTTCAGTGAATCTTTTGCAGTTAATGATGAAAAATATCTAGCTTGATCTAGTT
TTCAAGAAACTGACTCCAAA

Downstream 100 bases:

>100_bases
GTTTATTCAATAATAAATTTGTGGAAATTAATTTTGTAAATTATTAAATTTCTCAAATTCATCAAGATTATTTCAGCCCT
TTTTTTGTTTTACTATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MPKKQKSQKKLKKKGKPATPQISKKKLAARKRKRAKQIQQFIGSLATYGGLGAIIGLVLFFVAEPKIGLAGGFGLAVLAL
SFKYPMLGLWGFLMYLPFAGTVTYWVGDGGPIFQLAKDGFYIPAIIAISLWCKKTGNPFIIPKSIKNPLYALLGLCLITL
FLVNGVQHFNPPQPGDKAIPMGILGLKVMIGYLPLITGAYYQLKSKKELLFVARLTLILAIICCLLTIVQYQYLSSGKCN
GTRGQTGDALFKASLEAKCLVGGALVFSPSQGMIRLPGTFVAPWQWGWFLISNAAFTFAVAFSDPSSLWRMGGLFGMAVV
FINAAISGQRIALALVPTTTIILLILTGQLANFKRLIPIGAGLAVILGGLIVSNPVIVQERINSFVGRWNASPPTAFISE
QFEQSNHAQKGFFGIGLGRATNSARVFGKTKLIETYYPKLIYEIGPIGTIAMLVLLTNITVSTFKAYRSVKDKNMRSLGA
SYWVFVLIISYNTYYYPLDVDPVAVYYWYFAGVIMKLPEIDKIEQIKLKEAEEN

Sequences:

>Translated_534_residues
MPKKQKSQKKLKKKGKPATPQISKKKLAARKRKRAKQIQQFIGSLATYGGLGAIIGLVLFFVAEPKIGLAGGFGLAVLAL
SFKYPMLGLWGFLMYLPFAGTVTYWVGDGGPIFQLAKDGFYIPAIIAISLWCKKTGNPFIIPKSIKNPLYALLGLCLITL
FLVNGVQHFNPPQPGDKAIPMGILGLKVMIGYLPLITGAYYQLKSKKELLFVARLTLILAIICCLLTIVQYQYLSSGKCN
GTRGQTGDALFKASLEAKCLVGGALVFSPSQGMIRLPGTFVAPWQWGWFLISNAAFTFAVAFSDPSSLWRMGGLFGMAVV
FINAAISGQRIALALVPTTTIILLILTGQLANFKRLIPIGAGLAVILGGLIVSNPVIVQERINSFVGRWNASPPTAFISE
QFEQSNHAQKGFFGIGLGRATNSARVFGKTKLIETYYPKLIYEIGPIGTIAMLVLLTNITVSTFKAYRSVKDKNMRSLGA
SYWVFVLIISYNTYYYPLDVDPVAVYYWYFAGVIMKLPEIDKIEQIKLKEAEEN
>Mature_533_residues
PKKQKSQKKLKKKGKPATPQISKKKLAARKRKRAKQIQQFIGSLATYGGLGAIIGLVLFFVAEPKIGLAGGFGLAVLALS
FKYPMLGLWGFLMYLPFAGTVTYWVGDGGPIFQLAKDGFYIPAIIAISLWCKKTGNPFIIPKSIKNPLYALLGLCLITLF
LVNGVQHFNPPQPGDKAIPMGILGLKVMIGYLPLITGAYYQLKSKKELLFVARLTLILAIICCLLTIVQYQYLSSGKCNG
TRGQTGDALFKASLEAKCLVGGALVFSPSQGMIRLPGTFVAPWQWGWFLISNAAFTFAVAFSDPSSLWRMGGLFGMAVVF
INAAISGQRIALALVPTTTIILLILTGQLANFKRLIPIGAGLAVILGGLIVSNPVIVQERINSFVGRWNASPPTAFISEQ
FEQSNHAQKGFFGIGLGRATNSARVFGKTKLIETYYPKLIYEIGPIGTIAMLVLLTNITVSTFKAYRSVKDKNMRSLGAS
YWVFVLIISYNTYYYPLDVDPVAVYYWYFAGVIMKLPEIDKIEQIKLKEAEEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58523; Mature: 58391

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKQKSQKKLKKKGKPATPQISKKKLAARKRKRAKQIQQFIGSLATYGGLGAIIGLVLF
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FVAEPKIGLAGGFGLAVLALSFKYPMLGLWGFLMYLPFAGTVTYWVGDGGPIFQLAKDGF
HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHCCCC
YIPAIIAISLWCKKTGNPFIIPKSIKNPLYALLGLCLITLFLVNGVQHFNPPQPGDKAIP
CHHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
MGILGLKVMIGYLPLITGAYYQLKSKKELLFVARLTLILAIICCLLTIVQYQYLSSGKCN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GTRGQTGDALFKASLEAKCLVGGALVFSPSQGMIRLPGTFVAPWQWGWFLISNAAFTFAV
CCCCCCCHHHHHHCCCCEEEECCEEEEECCCCEEECCCCEECCCCCCHHEEECCEEEEEE
AFSDPSSLWRMGGLFGMAVVFINAAISGQRIALALVPTTTIILLILTGQLANFKRLIPIG
EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCHHHHCCC
AGLAVILGGLIVSNPVIVQERINSFVGRWNASPPTAFISEQFEQSNHAQKGFFGIGLGRA
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
TNSARVFGKTKLIETYYPKLIYEIGPIGTIAMLVLLTNITVSTFKAYRSVKDKNMRSLGA
CCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SYWVFVLIISYNTYYYPLDVDPVAVYYWYFAGVIMKLPEIDKIEQIKLKEAEEN
HHEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
PKKQKSQKKLKKKGKPATPQISKKKLAARKRKRAKQIQQFIGSLATYGGLGAIIGLVLF
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FVAEPKIGLAGGFGLAVLALSFKYPMLGLWGFLMYLPFAGTVTYWVGDGGPIFQLAKDGF
HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHCCCC
YIPAIIAISLWCKKTGNPFIIPKSIKNPLYALLGLCLITLFLVNGVQHFNPPQPGDKAIP
CHHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
MGILGLKVMIGYLPLITGAYYQLKSKKELLFVARLTLILAIICCLLTIVQYQYLSSGKCN
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GTRGQTGDALFKASLEAKCLVGGALVFSPSQGMIRLPGTFVAPWQWGWFLISNAAFTFAV
CCCCCCCHHHHHHCCCCEEEECCEEEEECCCCEEECCCCEECCCCCCHHEEECCEEEEEE
AFSDPSSLWRMGGLFGMAVVFINAAISGQRIALALVPTTTIILLILTGQLANFKRLIPIG
EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCHHHHCCC
AGLAVILGGLIVSNPVIVQERINSFVGRWNASPPTAFISEQFEQSNHAQKGFFGIGLGRA
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
TNSARVFGKTKLIETYYPKLIYEIGPIGTIAMLVLLTNITVSTFKAYRSVKDKNMRSLGA
CCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SYWVFVLIISYNTYYYPLDVDPVAVYYWYFAGVIMKLPEIDKIEQIKLKEAEEN
HHEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA