Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474833

Identifier: 113474833

GI number: 113474833

Start: 1643890

End: 1644078

Strand: Reverse

Name: 113474833

Synonym: Tery_1050

Alternate gene names: NA

Gene position: 1644078-1643890 (Counterclockwise)

Preceding gene: 113474834

Following gene: 113474832

Centisome position: 21.21

GC content: 37.04

Gene sequence:

>189_bases
TTGTATGAAGCATTTCCTGCTCCCGAAGCTCATCACTTAGCTAGACGTTTAGAAATCTATCATACTCCCGGTAATAGCAT
TTGGTTAAATGTGGCCGAGATTGAACTGATAATTTTAAGTAAACAGTGTTTAGACAGACATATTCCTACTACTGAGGAGT
TACACAAAGAGTTAGAAGCATGCAATTAA

Upstream 100 bases:

>100_bases
TTAGGCAAGTGAAGTTCGTCAACTTTTAGATATAAATTATCCCCAAGCTGGAAAAATCAAGTTAGTTTGTGATCATCTGA
ACACTCATAACATTGCTTCG

Downstream 100 bases:

>100_bases
GAGCATAATCAAACTGCTAGTAAGGTCACTTGGCATTTCTCCACTGAGGATGCCAGAGTCAAATTGCAACATCTTTATCC
TCTGTTTGAAGCTCCCGAAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MYEAFPAPEAHHLARRLEIYHTPGNSIWLNVAEIELIILSKQCLDRHIPTTEELHKELEACN

Sequences:

>Translated_62_residues
MYEAFPAPEAHHLARRLEIYHTPGNSIWLNVAEIELIILSKQCLDRHIPTTEELHKELEACN
>Mature_62_residues
MYEAFPAPEAHHLARRLEIYHTPGNSIWLNVAEIELIILSKQCLDRHIPTTEELHKELEACN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7206; Mature: 7206

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEAFPAPEAHHLARRLEIYHTPGNSIWLNVAEIELIILSKQCLDRHIPTTEELHKELEA
CCCCCCCCCHHHHHHHHHEEECCCCEEEEEEHHEEEEEECHHHHHCCCCCHHHHHHHHHC
CN
CC
>Mature Secondary Structure
MYEAFPAPEAHHLARRLEIYHTPGNSIWLNVAEIELIILSKQCLDRHIPTTEELHKELEA
CCCCCCCCCHHHHHHHHHEEECCCCEEEEEEHHEEEEEECHHHHHCCCCCHHHHHHHHHC
CN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA