Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474818

Identifier: 113474818

GI number: 113474818

Start: 1615167

End: 1615469

Strand: Direct

Name: 113474818

Synonym: Tery_1034

Alternate gene names: NA

Gene position: 1615167-1615469 (Clockwise)

Preceding gene: 113474814

Following gene: 113474819

Centisome position: 20.84

GC content: 29.37

Gene sequence:

>303_bases
ATGAACGAATTATCAATTATCCAAAAAACTTACGACTTAATCATTTGGTATGTACCAATAATTAACAGACTACCTAAAAC
TCACAAATTTCAAATTGGCGATCGCTTAGTCAACAACTTATATAATTTTCTAGAACTACTAATTATTGCCAAATATGCCT
CAGAAAAACTCAACATACTAGAATCTCTAAACCCCAAACTAGACATAGTTCGTTATCAAAACAGAATTATTTTAGACTTC
CAAATAATCAACAATAAACGCTACGAATATATCAGCCAAATAATCACAGAAATAGGCAAATAA

Upstream 100 bases:

>100_bases
TAATTTCATGGGAAAGAAACTGAAAAACAGTTAGCTTTAGGTTTTCTATTGACTCTTTTTGCACTTCCCCGAAATAGTAT
AAAAATTTAATCGCTATAGA

Downstream 100 bases:

>100_bases
TTAGGAATTTGGATTAAACAACAAAAACCGAAAAATCCTTAAACCATCAAACATGAAAAGACAGAAAAACTTATATCCCC
AAATTACATGTTTTGACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MNELSIIQKTYDLIIWYVPIINRLPKTHKFQIGDRLVNNLYNFLELLIIAKYASEKLNILESLNPKLDIVRYQNRIILDF
QIINNKRYEYISQIITEIGK

Sequences:

>Translated_100_residues
MNELSIIQKTYDLIIWYVPIINRLPKTHKFQIGDRLVNNLYNFLELLIIAKYASEKLNILESLNPKLDIVRYQNRIILDF
QIINNKRYEYISQIITEIGK
>Mature_100_residues
MNELSIIQKTYDLIIWYVPIINRLPKTHKFQIGDRLVNNLYNFLELLIIAKYASEKLNILESLNPKLDIVRYQNRIILDF
QIINNKRYEYISQIITEIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11997; Mature: 11997

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELSIIQKTYDLIIWYVPIINRLPKTHKFQIGDRLVNNLYNFLELLIIAKYASEKLNIL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNPKLDIVRYQNRIILDFQIINNKRYEYISQIITEIGK
HHCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNELSIIQKTYDLIIWYVPIINRLPKTHKFQIGDRLVNNLYNFLELLIIAKYASEKLNIL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNPKLDIVRYQNRIILDFQIINNKRYEYISQIITEIGK
HHCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA