| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474813
Identifier: 113474813
GI number: 113474813
Start: 1601167
End: 1601847
Strand: Direct
Name: 113474813
Synonym: Tery_1026
Alternate gene names: NA
Gene position: 1601167-1601847 (Clockwise)
Preceding gene: 113474811
Following gene: 113474814
Centisome position: 20.66
GC content: 32.01
Gene sequence:
>681_bases ATGACATACAAACACAGTAAATTTACAAAAATTAGAATGGGTAATCAGCTAAATAAAATTTTGACTATTGTAATAGTTAC CTGTACAAGTTTAATTTTTTTCAGCACTACAGAATTAGCAATGGCTCACCATCCAATGGGGGGTAAAATACCAGCTAATT TTTGGGAAGGTTTAATTTCTGGTATGGGACATCCAATTATTGGCATAGATCATTTGTCTTTTGTCGTTGGAGTTGGATTA ATTGCAGCAGGAATGTCTAACTCTATATTAGTTTTAGTATCTTTTCTGGCTACAGCAATGCTAGGAACAGGTATTCATCT TCTTAGCATTGATTTACCTTTGACAGAAATAGCGATCGCTATTTCTGTGGTTGCTTTGGGTGCAATGTTAGCTTTCAAAC AAAAACTAAATACTCCTTTAGTGATTATCTTTGCTGCTATTTCTGGTATATTTCATGGTTATGCTTATGGAGAAGCAATT ATTGGTTCAGAAATGACTCCATTATTAGCATATTTGATAGGTTTTACTGCAATGCAATTATTCATAGCATTATTTGCAAT GAAGTCTGCTGAATTAGTTAGTAGTTATTGGCAAAACCAATTTTTTAGATTAATGAGTTTTTTAGGTTTATTTATAAGTA CTATTGGACTGGTGTTTTTCACAAAAGCTATTTTGAATTGA
Upstream 100 bases:
>100_bases CCATGTCTCGTAAGAGTAGCATCAAGAGGATTTTATTGAAGCTATAATACCCAGCAAAATCAAAACAAAATTATTAAGAC AATAAATCTACGAGGTTAGG
Downstream 100 bases:
>100_bases TATTATGCATGGTTTTTAAGTTAGTAATGTATATTTTTTTTGCGTTGCGGAATAACCATAATACTCTAGAATTTAGTAGA TAGAAACAAGTTTTTATATT
Product: HupE/UreJ protein
Products: NA
Alternate protein names: HupE/UreJ Protein; HupE / UreJ Protein; HupE/UreJ Family Protein; HupE / UreJ Family Protein; Hydrogenase Accessory Protein HupE / UreJ Protein; Hydrogenase Accessory Protein HupE/UreJ Protein
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGL IAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAI IGSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN
Sequences:
>Translated_226_residues MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGL IAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAI IGSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN >Mature_225_residues TYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGLI AAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAII GSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN
Specific function: Unknown
COG id: COG2370
COG function: function code O; Hydrogenase/urease accessory protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24441; Mature: 24310
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLIS CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GMGHPIIGIDHLSFVVGVGLIAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIA CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHH ISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAIIGSEMTPLLAYLIGFTAMQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLIS CCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH GMGHPIIGIDHLSFVVGVGLIAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIA CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHH ISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAIIGSEMTPLLAYLIGFTAMQL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA