| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is psaE
Identifier: 113474803
GI number: 113474803
Start: 1581744
End: 1581953
Strand: Direct
Name: psaE
Synonym: Tery_1014
Alternate gene names: 113474803
Gene position: 1581744-1581953 (Clockwise)
Preceding gene: 113474802
Following gene: 113474804
Centisome position: 20.41
GC content: 36.67
Gene sequence:
>210_bases ATGGTTAAACGTGGTTCTAAAGTTCGGATTTTACGCAAAGAATCCTACTGGTATCAGGATGTTGGTACAGTTGCTTCTGT TGACAAAAGTGGCATTAAGTATCCAGTTATTGTTCGCTTTGATAAAGTAAATTACGCTGGTTCCAGTGGTAGTCCAACTG GGGTTAATACTAATAACTTTGCTATAGATGAAGTTGTAGAGATTAGTTAA
Upstream 100 bases:
>100_bases AGTTAATTGCAATAAAACTTAAAAAAAAATCAGACAAAAAAGAGATACGATAATATCATAATTTTACTATACTCTAGTTT AAGAGTTTAAGGAAAAAATC
Downstream 100 bases:
>100_bases CTATTGTTGAAGATTTAATATTTATTCACATAAGTTTATATATATTGATCTAGTTATACTGAATCAAGTTATATAGATTT TGGTAAAATCTGACAAATAG
Product: photosystem I reaction center subunit IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MVKRGSKVRILRKESYWYQDVGTVASVDKSGIKYPVIVRFDKVNYAGSSGSPTGVNTNNFAIDEVVEIS
Sequences:
>Translated_69_residues MVKRGSKVRILRKESYWYQDVGTVASVDKSGIKYPVIVRFDKVNYAGSSGSPTGVNTNNFAIDEVVEIS >Mature_69_residues MVKRGSKVRILRKESYWYQDVGTVASVDKSGIKYPVIVRFDKVNYAGSSGSPTGVNTNNFAIDEVVEIS
Specific function: Stabilizes the interaction between psaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAE_TRIEI (Q117D3)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720864.1 - ProteinModelPortal: Q117D3 - SMR: Q117D3 - STRING: Q117D3 - GeneID: 4245541 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1014 - NMPDR: fig|203124.1.peg.6170 - eggNOG: NOG08807 - HOGENOM: HBG599647 - OMA: GINTNNF - ProtClustDB: PRK02749 - BioCyc: TERY203124:TERY_1014-MONOMER - GO: GO:0009536 - GO: GO:0015979 - HAMAP: MF_00613 - InterPro: IPR008990 - InterPro: IPR003375 - ProDom: PD004772
Pfam domain/function: PF02427 PSI_PsaE; SSF50090 E_transp_acc
EC number: NA
Molecular weight: Translated: 7628; Mature: 7628
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRGSKVRILRKESYWYQDVGTVASVDKSGIKYPVIVRFDKVNYAGSSGSPTGVNTNNF CCCCCCEEEEEECCCCEECCCCCEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCE AIDEVVEIS EECEEEECC >Mature Secondary Structure MVKRGSKVRILRKESYWYQDVGTVASVDKSGIKYPVIVRFDKVNYAGSSGSPTGVNTNNF CCCCCCEEEEEECCCCEECCCCCEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCE AIDEVVEIS EECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA