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The map label for this gene is cpeA [H]

Identifier: 113474775

GI number: 113474775

Start: 1547518

End: 1548006

Strand: Reverse

Name: cpeA [H]

Synonym: Tery_0983

Alternate gene names: 113474775

Gene position: 1548006-1547518 (Counterclockwise)

Preceding gene: 113474776

Following gene: 113474774

Centisome position: 19.97

GC content: 40.7

Gene sequence:

>489_bases
ATGAAATCAGTTTTAACCACAACAATTGCATCTGCAGATTTAGGTGGTCGTTATCCGAGTAGTTCTGACTTAGAGTCAGT
TCAAGGTAGTTTACAACGTGCAGCAGCTCGTATGGAAGCTGCAGAAAAATTAGCTTCTAACTATGATGCGGTTGCTCAAG
AAGCTGTTGACGCAATTTATGCTAAATACCCCAGTGGAAGTGGCAAAGATATTGGTGCAGAAGTTCAAAAAAGCAAGTGT
AAGCGTGACATCGTTCACTATTTACGTTTAATCAATTATTGTTTGGTAGTTGGTGGTACAGGTCCTGTTGATGAATGGGG
TATTGCAGGTGCTCGTGAAGTTTATAAAGCACTGGGAATTAGCACTGATACTTATGTGACTGGTTTAGCTAAAATTCGTG
ACCGCCTTTGTGTTCCTCGTGATATGTCTGGTCAAGCAGCAACTGAATTAACAGCATATCTTGATTACGTGATCAACGCT
ATGTCCTAA

Upstream 100 bases:

>100_bases
GCAGCTATTAGCTAGAATCCAAGAATTTTTCGTTCATATATTTTTTATTTTTTTGTGCTTTATCAATTTTTACAATTTTT
AAGAGGGGAGAATCTCAATT

Downstream 100 bases:

>100_bases
TCATAGGTATGTCTCAAATGAGAAAAAAGTAACGATTTTTGATAGCTGAAGGATTCTGCAGCCTTTTATTTGACTGGAAC
AGTTAAGTAATGGACTCAGC

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKSVLTTTIASADLGGRYPSSSDLESVQGSLQRAAARMEAAEKLASNYDAVAQEAVDAIYAKYPSGSGKDIGAEVQKSKC
KRDIVHYLRLINYCLVVGGTGPVDEWGIAGAREVYKALGISTDTYVTGLAKIRDRLCVPRDMSGQAATELTAYLDYVINA
MS

Sequences:

>Translated_162_residues
MKSVLTTTIASADLGGRYPSSSDLESVQGSLQRAAARMEAAEKLASNYDAVAQEAVDAIYAKYPSGSGKDIGAEVQKSKC
KRDIVHYLRLINYCLVVGGTGPVDEWGIAGAREVYKALGISTDTYVTGLAKIRDRLCVPRDMSGQAATELTAYLDYVINA
MS
>Mature_162_residues
MKSVLTTTIASADLGGRYPSSSDLESVQGSLQRAAARMEAAEKLASNYDAVAQEAVDAIYAKYPSGSGKDIGAEVQKSKC
KRDIVHYLRLINYCLVVGGTGPVDEWGIAGAREVYKALGISTDTYVTGLAKIRDRLCVPRDMSGQAATELTAYLDYVINA
MS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 17307; Mature: 17307

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVLTTTIASADLGGRYPSSSDLESVQGSLQRAAARMEAAEKLASNYDAVAQEAVDAIY
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKYPSGSGKDIGAEVQKSKCKRDIVHYLRLINYCLVVGGTGPVDEWGIAGAREVYKALGI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCC
STDTYVTGLAKIRDRLCVPRDMSGQAATELTAYLDYVINAMS
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVLTTTIASADLGGRYPSSSDLESVQGSLQRAAARMEAAEKLASNYDAVAQEAVDAIY
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKYPSGSGKDIGAEVQKSKCKRDIVHYLRLINYCLVVGGTGPVDEWGIAGAREVYKALGI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCC
STDTYVTGLAKIRDRLCVPRDMSGQAATELTAYLDYVINAMS
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2431391; 3092842 [H]