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The map label for this gene is mpeB [H]

Identifier: 113474776

GI number: 113474776

Start: 1548092

End: 1548631

Strand: Reverse

Name: mpeB [H]

Synonym: Tery_0984

Alternate gene names: 113474776

Gene position: 1548631-1548092 (Counterclockwise)

Preceding gene: 113474779

Following gene: 113474775

Centisome position: 19.98

GC content: 41.67

Gene sequence:

>540_bases
ATGCTCGATGCATTTTCTAGATCAGTAATTTCGGCAGACAGTAGCGGTTCTTTCATTGATGGTGCTGGGTTAGAATCACT
TAAATCCTTTATTGCAGACGGAAATAAACGTCTTGATGCAGTCAACTTTATTGCTAGTAATGCTAGCTGTATCGTTAGCG
ATGCTGTAGCAGGTATCTGTTGTGAAAGTCCTGGTTTGACTTCACCAGGTGGTGGTGTTTATACTACCCGTAAAATGGCA
GCTTGCTTGCGTGATGGTGACATAATTCTTCGTTATATTTGTTATGCTCTTCTCGCTGGTGATGCTTCCGTACTCAATGA
CCGTTGTTTAAATGGTCTGAAAGAAACATATGCAGCATTAGGTGTACCAGCTGGAAATGCAGCTCGTGCAGTTGCTATTA
TGAAAGCAGCAGCTGTAGCTTTTGTAACTAATACAGCTTCTCAACGTAAAATGACTGTAACTGAACAACCAGGATCTTGT
GATTCTTTAGCGGCAGAAGTTGGTGGTTACTTTGATGCTGTTGTTGCAGCTATTAGCTAG

Upstream 100 bases:

>100_bases
TTTATATTATATCCGAACGGTTAAATTAAGTAAACCAAATAATTAGTCCCTCACATTCTATTAGGGACGAAGAAAAAAAT
AAAAAATCAGGAGATTAAAT

Downstream 100 bases:

>100_bases
AATCCAAGAATTTTTCGTTCATATATTTTTTATTTTTTTGTGCTTTATCAATTTTTACAATTTTTAAGAGGGGAGAATCT
CAATTATGAAATCAGTTTTA

Product: phycobilisome protein

Products: NA

Alternate protein names: C-phycoerythrin class II beta chain [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLDAFSRSVISADSSGSFIDGAGLESLKSFIADGNKRLDAVNFIASNASCIVSDAVAGICCESPGLTSPGGGVYTTRKMA
ACLRDGDIILRYICYALLAGDASVLNDRCLNGLKETYAALGVPAGNAARAVAIMKAAAVAFVTNTASQRKMTVTEQPGSC
DSLAAEVGGYFDAVVAAIS

Sequences:

>Translated_179_residues
MLDAFSRSVISADSSGSFIDGAGLESLKSFIADGNKRLDAVNFIASNASCIVSDAVAGICCESPGLTSPGGGVYTTRKMA
ACLRDGDIILRYICYALLAGDASVLNDRCLNGLKETYAALGVPAGNAARAVAIMKAAAVAFVTNTASQRKMTVTEQPGSC
DSLAAEVGGYFDAVVAAIS
>Mature_179_residues
MLDAFSRSVISADSSGSFIDGAGLESLKSFIADGNKRLDAVNFIASNASCIVSDAVAGICCESPGLTSPGGGVYTTRKMA
ACLRDGDIILRYICYALLAGDASVLNDRCLNGLKETYAALGVPAGNAARAVAIMKAAAVAFVTNTASQRKMTVTEQPGSC
DSLAAEVGGYFDAVVAAIS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 18219; Mature: 18219

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAFSRSVISADSSGSFIDGAGLESLKSFIADGNKRLDAVNFIASNASCIVSDAVAGIC
CCCCHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
CESPGLTSPGGGVYTTRKMAACLRDGDIILRYICYALLAGDASVLNDRCLNGLKETYAAL
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPAGNAARAVAIMKAAAVAFVTNTASQRKMTVTEQPGSCDSLAAEVGGYFDAVVAAIS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDAFSRSVISADSSGSFIDGAGLESLKSFIADGNKRLDAVNFIASNASCIVSDAVAGIC
CCCCHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
CESPGLTSPGGGVYTTRKMAACLRDGDIILRYICYALLAGDASVLNDRCLNGLKETYAAL
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPAGNAARAVAIMKAAAVAFVTNTASQRKMTVTEQPGSCDSLAAEVGGYFDAVVAAIS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917641 [H]