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The map label for this gene is 113474773

Identifier: 113474773

GI number: 113474773

Start: 1545701

End: 1546360

Strand: Reverse

Name: 113474773

Synonym: Tery_0980

Alternate gene names: NA

Gene position: 1546360-1545701 (Counterclockwise)

Preceding gene: 113474774

Following gene: 113474772

Centisome position: 19.95

GC content: 38.79

Gene sequence:

>660_bases
ATGGTAACTACAGATATATATCAACAATTAAAAAATAAAAATCCTGTTTTACGACAAAGAGCTATGAGCAAAATTGTCGA
AGAACCTACCAGTGAATCAATTCCTCAGTTGATAGAGATTTTATCAGATGAAAATCCTAATTACCGTAATGGAGCTACCC
AAACTTTAACAGTAATTGGTCTACCAGCAATTCCTGCTTTAGCTGAAGAATTGATTAATAATGACAGCCATCAAGTTAGA
GCTTCCTGTGTCCAAGCTTTTTCGGAAATTGCTCGTTTCTTTCCTCATGATTATCCTGGAGAGACTTTCCCTCAAGTTGC
TATTGATGCATTGCACAAAGCTCTCAATGACCCCAGTTCTGCAATTCAAGTTGCAGCCACTGGTGCTCTGGGAACAATTG
GTAAGCCAGCTCTAGAAATTCTACTGTCGGCTTTAGACACAGAAGATATTGCACTGCGTCTTTCGGTCATTCAGGCGATC
GTATCTTCAAATGTCTTAAAAGGTGCTGAAGATGACCCTAAAACCATAGAGGACTATGATCGAATAGCAAATCTATTATC
TAAAATTGCTGAGGATGAAACGGTAGATTCTTATATTCGTGAAACAGCTCAAGCAGCTTTGACTCGCATGGCTGCCTCAA
AAGTCAAAACTCGTTATTAA

Upstream 100 bases:

>100_bases
TTAGATTCAGATTGGCCAGTTTTAGCTAAAGTCTAATGTTTTATCAATTAAATTATAATCCAATATTATACCCCAAAATT
AGTTAATTTGTCAACTATTT

Downstream 100 bases:

>100_bases
TTAATTTAGGTATTAAAACTCAAAAACTTGTAATTGGCAAAATTATAAAACAAACTTTTTTTGGTTATGATAACTTCAAA
TTTTAAAACACAAGAAAATG

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: ORF Z [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVTTDIYQQLKNKNPVLRQRAMSKIVEEPTSESIPQLIEILSDENPNYRNGATQTLTVIGLPAIPALAEELINNDSHQVR
ASCVQAFSEIARFFPHDYPGETFPQVAIDALHKALNDPSSAIQVAATGALGTIGKPALEILLSALDTEDIALRLSVIQAI
VSSNVLKGAEDDPKTIEDYDRIANLLSKIAEDETVDSYIRETAQAALTRMAASKVKTRY

Sequences:

>Translated_219_residues
MVTTDIYQQLKNKNPVLRQRAMSKIVEEPTSESIPQLIEILSDENPNYRNGATQTLTVIGLPAIPALAEELINNDSHQVR
ASCVQAFSEIARFFPHDYPGETFPQVAIDALHKALNDPSSAIQVAATGALGTIGKPALEILLSALDTEDIALRLSVIQAI
VSSNVLKGAEDDPKTIEDYDRIANLLSKIAEDETVDSYIRETAQAALTRMAASKVKTRY
>Mature_219_residues
MVTTDIYQQLKNKNPVLRQRAMSKIVEEPTSESIPQLIEILSDENPNYRNGATQTLTVIGLPAIPALAEELINNDSHQVR
ASCVQAFSEIARFFPHDYPGETFPQVAIDALHKALNDPSSAIQVAATGALGTIGKPALEILLSALDTEDIALRLSVIQAI
VSSNVLKGAEDDPKTIEDYDRIANLLSKIAEDETVDSYIRETAQAALTRMAASKVKTRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 23887; Mature: 23887

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTDIYQQLKNKNPVLRQRAMSKIVEEPTSESIPQLIEILSDENPNYRNGATQTLTVIG
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHC
LPAIPALAEELINNDSHQVRASCVQAFSEIARFFPHDYPGETFPQVAIDALHKALNDPSS
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
AIQVAATGALGTIGKPALEILLSALDTEDIALRLSVIQAIVSSNVLKGAEDDPKTIEDYD
HHHHHHCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RIANLLSKIAEDETVDSYIRETAQAALTRMAASKVKTRY
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTTDIYQQLKNKNPVLRQRAMSKIVEEPTSESIPQLIEILSDENPNYRNGATQTLTVIG
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHC
LPAIPALAEELINNDSHQVRASCVQAFSEIARFFPHDYPGETFPQVAIDALHKALNDPSS
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
AIQVAATGALGTIGKPALEILLSALDTEDIALRLSVIQAIVSSNVLKGAEDDPKTIEDYD
HHHHHHCCCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RIANLLSKIAEDETVDSYIRETAQAALTRMAASKVKTRY
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809846 [H]